RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 CAPN2P17655 700 aa8.82□□□□□ -1
NECTIN3-209ENST00000488016 KRT2P35908 639 aa8.82□□□□□ -1
NECTIN3-209ENST00000488016 TCF7P36402 384 aaPredicted RBP8.82□□□□□ -1
NECTIN3-209ENST00000488016 TBC1D8BQ0IIM8 1120 aa8.82□□□□□ -1
NECTIN3-209ENST00000488016 NEDD9Q14511 834 aa8.82□□□□□ -1
NECTIN3-209ENST00000488016 LETM2Q2VYF4 491 aa8.82□□□□□ -1
NECTIN3-209ENST00000488016 XRRA1Q6P2D8 792 aa8.82□□□□□ -1
NECTIN3-209ENST00000488016 TRMT1LQ7Z2T5 733 aaKnown RBP8.82□□□□□ -1
NECTIN3-209ENST00000488016 ANKRD33Q7Z3H0 272 aa8.82□□□□□ -1
NECTIN3-209ENST00000488016 DIS3L2Q8IYB7 885 aaKnown RBP8.82□□□□□ -1
NECTIN3-209ENST00000488016 ZNF417Q8TAU3 575 aa8.82□□□□□ -1
NECTIN3-209ENST00000488016 BICD2Q8TD16 824 aa8.82□□□□□ -1
NECTIN3-209ENST00000488016 TRIM11Q96F44 468 aa8.82□□□□□ -1
NECTIN3-209ENST00000488016 SCLYQ96I15 445 aa8.82□□□□□ -1
NECTIN3-209ENST00000488016 ZSCAN31Q96LW9 406 aaPredicted RBP8.82□□□□□ -1
NECTIN3-209ENST00000488016 ZNF587Q96SQ5 575 aaPredicted RBP8.82□□□□□ -1
NECTIN3-209ENST00000488016 GLT8D2Q9H1C3 349 aa8.82□□□□□ -1
NECTIN3-209ENST00000488016 JPH1Q9HDC5 661 aaPredicted RBP8.82□□□□□ -1
NECTIN3-209ENST00000488016 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.82□□□□□ -1
NECTIN3-209ENST00000488016 SH2B1Q9NRF2 756 aaPredicted RBP8.82□□□□□ -1
NECTIN3-209ENST00000488016 TRIP12Q14669 1992 aaPredicted RBP8.82□□□□□ -1
NECTIN3-209ENST00000488016 CDH23Q9H251 3354 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 CCDC194A0A1B0GVG4 234 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 DCDC2CA8MYV0 355 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 HAS3O00219 553 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 CABYRO75952 493 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 SMIM10L2AP0DMW4 78 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 SMIM10L2BP0DMW5 78 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 ACRP10323 421 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 TGFB3P10600 412 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 ATP2B1P20020 1258 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 WEE1P30291 646 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 CCL23P55773 120 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 ACTR2P61160 394 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 NONOQ15233 471 aaKnown RBP eCLIP8.81□□□□□ -1
NECTIN3-209ENST00000488016 NFKBIBQ15653 356 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 BRDTQ58F21 947 aaPredicted RBP8.81□□□□□ -1
NECTIN3-209ENST00000488016 C9orf50Q5SZB4 431 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 KCNV1Q6PIU1 500 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 CCDC60Q8IWA6 550 aaPredicted RBP8.81□□□□□ -1
NECTIN3-209ENST00000488016 TRAPPC12Q8WVT3 735 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 DHX38Q92620 1227 aaKnown RBP8.81□□□□□ -1
NECTIN3-209ENST00000488016 C8orf76Q96K31 380 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 GDF15Q99988 308 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 SENP7Q9BQF6 1050 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 ZNF577Q9BSK1 485 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 UBE2OQ9C0C9 1292 aaKnown RBP8.81□□□□□ -1
NECTIN3-209ENST00000488016 WNT8AQ9H1J5 351 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 RNPEPQ9H4A4 650 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 SLC9A2Q9UBY0 812 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 NOVA2Q9UNW9 492 aaKnown RBP8.81□□□□□ -1
NECTIN3-209ENST00000488016 SCN5AQ14524 2016 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 PRUNE2Q8WUY3 3088 aa8.81□□□□□ -1
NECTIN3-209ENST00000488016 H3BRB1 525 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 IPO5O00410 1097 aaKnown RBP8.8□□□□□ -1
NECTIN3-209ENST00000488016 KIAA0355O15063 1070 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 CCNT1O60563 726 aaKnown RBP8.8□□□□□ -1
NECTIN3-209ENST00000488016 RAG1P15918 1043 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 PTMSP20962 102 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 GJB2P29033 226 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 CIITAP33076 1130 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 IGBP1P78318 339 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 PTGISQ16647 500 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 PRRT3Q5FWE3 981 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 KRT25Q7Z3Z0 450 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 FAM184AQ8NB25 1140 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 WASF1Q92558 559 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 VWCEQ96DN2 955 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 CDHR1Q96JP9 859 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 FAM161BQ96MY7 647 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 TOX2Q96NM4 488 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 SDF4Q9BRK5 362 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 LLPHQ9BRT6 129 aaKnown RBP8.8□□□□□ -1
NECTIN3-209ENST00000488016 NOC4LQ9BVI4 516 aaKnown RBP8.8□□□□□ -1
NECTIN3-209ENST00000488016 OSBPL7Q9BZF2 842 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 UNC45AQ9H3U1 944 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 TUT1Q9H6E5 874 aaKnown RBP8.8□□□□□ -1
NECTIN3-209ENST00000488016 SETD4Q9NVD3 440 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 KLK14Q9P0G3 267 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 PRKAG2Q9UGJ0 569 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 GTF2IRD1Q9UHL9 959 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 NFASCO94856 1347 aa8.8□□□□□ -1
NECTIN3-209ENST00000488016 TMEM150BA6NC51 233 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 TLR3O15455 904 aaKnown RBP8.79□□□□□ -1
NECTIN3-209ENST00000488016 TREHO43280 583 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 PPFIA4O75335 1185 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 ALBP02768 609 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 CTSHP09668 335 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 SPATA31C1P0DKV0 1188 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 CSF2RAP15509 400 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 XBP1P17861 261 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 BMP8BP34820 402 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 SETQ01105 290 aaPredicted RBP8.79□□□□□ -1
NECTIN3-209ENST00000488016 PLCB4Q15147 1175 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 UGCGQ16739 394 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 TCTN1Q2MV58 587 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 GALNT17Q6IS24 598 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 NFRKBQ6P4R8 1299 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 ABHD15Q6UXT9 468 aa8.79□□□□□ -1
NECTIN3-209ENST00000488016 RUFY4Q6ZNE9 571 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms