RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 TCHHQ07283 1943 aa21.63■■□□□ 1.05
SEC22A-208ENST00000487572 TRIOBPQ9H2D6 2365 aa21.62■■□□□ 1.05
SEC22A-208ENST00000487572 MICAL3Q7RTP6 2002 aa21.62■■□□□ 1.05
SEC22A-208ENST00000487572 TBCAO75347 108 aaKnown RBP21.62■■□□□ 1.05
SEC22A-208ENST00000487572 FAM13AO94988 1023 aa21.62■■□□□ 1.05
SEC22A-208ENST00000487572 NPTX2P47972 431 aa21.62■■□□□ 1.05
SEC22A-208ENST00000487572 GIT2Q14161 759 aa21.62■■□□□ 1.05
SEC22A-208ENST00000487572 CDCA2Q69YH5 1023 aaPredicted RBP21.62■■□□□ 1.05
SEC22A-208ENST00000487572 HERC6Q8IVU3 1022 aa21.62■■□□□ 1.05
SEC22A-208ENST00000487572 FSIP1Q8NA03 581 aa21.62■■□□□ 1.05
SEC22A-208ENST00000487572 PHOSPHO2Q8TCD6 241 aa21.62■■□□□ 1.05
SEC22A-208ENST00000487572 ZBED2Q9BTP6 218 aa21.62■■□□□ 1.05
SEC22A-208ENST00000487572 NFKBIZQ9BYH8 718 aa21.62■■□□□ 1.05
SEC22A-208ENST00000487572 C2orf40Q9H1Z8 148 aa21.62■■□□□ 1.05
SEC22A-208ENST00000487572 ODF2LQ9ULJ1 636 aa21.62■■□□□ 1.05
SEC22A-208ENST00000487572 ADGRA3Q8IWK6 1321 aa21.61■■□□□ 1.05
SEC22A-208ENST00000487572 GOLGA6L4A6NEF3 574 aa21.61■■□□□ 1.05
SEC22A-208ENST00000487572 MYMKA6NI61 221 aa21.61■■□□□ 1.05
SEC22A-208ENST00000487572 PLS3P13797 630 aa21.61■■□□□ 1.05
SEC22A-208ENST00000487572 DSC3Q14574 896 aa21.61■■□□□ 1.05
SEC22A-208ENST00000487572 IFNLR1Q8IU57 520 aaPredicted RBP21.61■■□□□ 1.05
SEC22A-208ENST00000487572 CUEDC2Q9H467 287 aa21.61■■□□□ 1.05
SEC22A-208ENST00000487572 KMT5AQ9NQR1 393 aa21.61■■□□□ 1.05
SEC22A-208ENST00000487572 RGS18Q9NS28 235 aa21.61■■□□□ 1.05
SEC22A-208ENST00000487572 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.6■■□□□ 1.05
SEC22A-208ENST00000487572 A0A1W2PQ27 194 aa21.6■■□□□ 1.05
SEC22A-208ENST00000487572 A0A1W2PQ64 194 aa21.6■■□□□ 1.05
SEC22A-208ENST00000487572 A0A1W2PQD8 194 aa21.6■■□□□ 1.05
SEC22A-208ENST00000487572 SLC16A4O15374 487 aa21.6■■□□□ 1.05
SEC22A-208ENST00000487572 TSPAN1O60635 241 aa21.6■■□□□ 1.05
SEC22A-208ENST00000487572 PBX2P40425 430 aa21.6■■□□□ 1.05
SEC22A-208ENST00000487572 TWF2Q6IBS0 349 aaKnown RBP21.6■■□□□ 1.05
SEC22A-208ENST00000487572 MYCT1Q8N699 235 aa21.6■■□□□ 1.05
SEC22A-208ENST00000487572 MRPS27Q92552 414 aaKnown RBP21.6■■□□□ 1.05
SEC22A-208ENST00000487572 DDX12PQ92771 950 aa21.6■■□□□ 1.05
SEC22A-208ENST00000487572 LRCH3Q96II8 777 aa21.6■■□□□ 1.05
SEC22A-208ENST00000487572 CPB2Q96IY4 423 aa21.6■■□□□ 1.05
SEC22A-208ENST00000487572 C1orf112Q9NSG2 853 aa21.6■■□□□ 1.05
SEC22A-208ENST00000487572 AGPAT5Q9NUQ2 364 aa21.6■■□□□ 1.05
SEC22A-208ENST00000487572 B4GALT5O43286 388 aa21.59■■□□□ 1.05
SEC22A-208ENST00000487572 MYOGP15173 224 aa21.59■■□□□ 1.05
SEC22A-208ENST00000487572 NDUFA8P51970 172 aa21.59■■□□□ 1.05
SEC22A-208ENST00000487572 SMAD3P84022 425 aaKnown RBP21.59■■□□□ 1.05
SEC22A-208ENST00000487572 SLC24A5Q71RS6 500 aa21.59■■□□□ 1.05
SEC22A-208ENST00000487572 TOP1MTQ969P6 601 aa21.59■■□□□ 1.05
SEC22A-208ENST00000487572 PYM1Q9BRP8 204 aaKnown RBP21.59■■□□□ 1.05
SEC22A-208ENST00000487572 PBX4Q9BYU1 374 aa21.59■■□□□ 1.05
SEC22A-208ENST00000487572 TNMDQ9H2S6 317 aa21.59■■□□□ 1.05
SEC22A-208ENST00000487572 GOLPH3LQ9H4A5 285 aa21.59■■□□□ 1.05
SEC22A-208ENST00000487572 C17orf75Q9HAS0 396 aa21.59■■□□□ 1.05
SEC22A-208ENST00000487572 PARVGQ9HBI0 331 aa21.59■■□□□ 1.05
SEC22A-208ENST00000487572 CHST12Q9NRB3 414 aa21.59■■□□□ 1.05
SEC22A-208ENST00000487572 LARSQ9P2J5 1176 aaKnown RBP21.59■■□□□ 1.05
SEC22A-208ENST00000487572 SERTAD1Q9UHV2 236 aa21.59■■□□□ 1.05
SEC22A-208ENST00000487572 LRFN2Q9ULH4 789 aa21.59■■□□□ 1.05
SEC22A-208ENST00000487572 TLL1O43897 1013 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 GJB5O95377 273 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 PRKCBP05771 671 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 SYKP43405 635 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 SARSP49591 514 aaKnown RBP21.58■■□□□ 1.05
SEC22A-208ENST00000487572 EFNA5P52803 228 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 SMTNP53814 917 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 NCBP1Q09161 790 aaKnown RBP21.58■■□□□ 1.05
SEC22A-208ENST00000487572 PCBP1Q15365 356 aaKnown RBP eCLIP21.58■■□□□ 1.05
SEC22A-208ENST00000487572 MAPK6Q16659 721 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 AMHR2Q16671 573 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 CSPP1Q1MSJ5 1256 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 TMEM132AQ24JP5 1023 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 CEP57L1Q8IYX8 460 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 RNF169Q8NCN4 708 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 CCDC113Q9H0I3 377 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 PRMT7Q9NVM4 692 aaPredicted RBP21.58■■□□□ 1.05
SEC22A-208ENST00000487572 KBTBD4Q9NVX7 518 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 DACT1Q9NYF0 836 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 MSRAQ9UJ68 235 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 HPSEQ9Y251 543 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 USP20Q9Y2K6 914 aa21.58■■□□□ 1.05
SEC22A-208ENST00000487572 PTPRSQ13332 1948 aa21.58■■□□□ 1.04
SEC22A-208ENST00000487572 C9IYK1 514 aa21.57■■□□□ 1.04
SEC22A-208ENST00000487572 IDEP14735 1019 aa21.57■■□□□ 1.04
SEC22A-208ENST00000487572 HOXA11P31270 313 aaPredicted RBP21.57■■□□□ 1.04
SEC22A-208ENST00000487572 AFMP43652 599 aa21.57■■□□□ 1.04
SEC22A-208ENST00000487572 ZNF131P52739 623 aa21.57■■□□□ 1.04
SEC22A-208ENST00000487572 RAB30Q15771 203 aa21.57■■□□□ 1.04
SEC22A-208ENST00000487572 FAM43BQ6ZT52 329 aaPredicted RBP21.57■■□□□ 1.04
SEC22A-208ENST00000487572 SPIRE2Q8WWL2 714 aa21.57■■□□□ 1.04
SEC22A-208ENST00000487572 DNAJC19Q96DA6 116 aa21.57■■□□□ 1.04
SEC22A-208ENST00000487572 LRRC27Q9C0I9 530 aa21.57■■□□□ 1.04
SEC22A-208ENST00000487572 FZD8Q9H461 694 aa21.57■■□□□ 1.04
SEC22A-208ENST00000487572 YBX2Q9Y2T7 364 aaKnown RBP21.57■■□□□ 1.04
SEC22A-208ENST00000487572 PCDHB7Q9Y5E2 793 aa21.57■■□□□ 1.04
SEC22A-208ENST00000487572 PCDHA11Q9Y5I1 949 aa21.57■■□□□ 1.04
SEC22A-208ENST00000487572 K7ERI5 159 aa21.56■■□□□ 1.04
SEC22A-208ENST00000487572 ACTN4O43707 911 aaKnown RBP21.56■■□□□ 1.04
SEC22A-208ENST00000487572 STAG3L1P0CL83 205 aa21.56■■□□□ 1.04
SEC22A-208ENST00000487572 ARF4P18085 180 aaPredicted RBP21.56■■□□□ 1.04
SEC22A-208ENST00000487572 DNAJB2P25686 324 aa21.56■■□□□ 1.04
SEC22A-208ENST00000487572 AMPD3Q01432 767 aa21.56■■□□□ 1.04
SEC22A-208ENST00000487572 PRPF4BQ13523 1007 aaKnown RBP21.56■■□□□ 1.04
SEC22A-208ENST00000487572 NOTUMQ6P988 496 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms