RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 LMBR1Q8WVP7 490 aa14.57□□□□□ -0.08
VTI1BP1-201ENST00000486325 BSNDQ8WZ55 320 aa14.57□□□□□ -0.08
VTI1BP1-201ENST00000486325 VTI1AQ96AJ9 217 aa14.57□□□□□ -0.08
VTI1BP1-201ENST00000486325 SAMSN1Q9NSI8 373 aaKnown RBP14.57□□□□□ -0.08
VTI1BP1-201ENST00000486325 HDAC6Q9UBN7 1215 aa14.57□□□□□ -0.08
VTI1BP1-201ENST00000486325 TRIM49BA6NDI0 452 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 LRRC10BA6NIK2 292 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 CBFA2T2O43439 604 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 TPM3P06753 285 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 TPM2P07951 284 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 SRGAP2CP0DJJ0 459 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 CYP2C9P11712 490 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 CAPN2P17655 700 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 HOXC8P31273 242 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 HOXD13P35453 343 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 CLCN3P51790 818 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 ACLYP53396 1101 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 CAPSQ13938 189 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 CDKAL1Q5VV42 579 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 TAF2Q6P1X5 1199 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 ZNF410Q86VK4 478 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 MAP4K3Q8IVH8 894 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 KIAA0319LQ8IZA0 1049 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 RNF149Q8NC42 400 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 GLT1D1Q96MS3 346 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 NFKBIZQ9BYH8 718 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 TRIM5Q9C035 493 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 AKT3Q9Y243 479 aa14.56□□□□□ -0.08
VTI1BP1-201ENST00000486325 KBTBD13C9JR72 458 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 TGFB1I1O43294 461 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 SERPINC1P01008 464 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 PRKCSHP14314 528 aaPredicted RBP14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 PHKA2P46019 1235 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 LBX1P52954 281 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 PTENP60484 403 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 DRP2Q13474 957 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 FILIP1LQ4L180 1135 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 CDCA2Q69YH5 1023 aaPredicted RBP14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 RSPH3Q86UC2 560 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 IFNLR1Q8IU57 520 aaPredicted RBP14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 SLC9A9Q8IVB4 645 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 C12orf56Q8IXR9 622 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 ZC3H3Q8IXZ2 948 aaKnown RBP14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 INO80BQ9C086 356 aaPredicted RBP14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 RNF208Q9H0X6 261 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 UNC93B1Q9H1C4 597 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 HSD3B7Q9H2F3 369 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 PAK6Q9NQU5 681 aaPredicted RBP14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 GTF2IRD1Q9UHL9 959 aa14.55□□□□□ -0.08
VTI1BP1-201ENST00000486325 KCNJ18B7U540 433 aa14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 KIAA0391O15091 583 aaKnown RBP14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 NR3C1P04150 777 aa14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 HSPA1AP0DMV8 641 aaKnown RBP14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 HSPA1BP0DMV9 641 aaKnown RBP14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 CCL5P13501 91 aa14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 NR2F2P24468 414 aa14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 UBASH3AP57075 661 aa14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 FANCCQ00597 558 aa14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 KCNA1Q09470 495 aa14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 ITGA7Q13683 1181 aa14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 KCNJ12Q14500 433 aa14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 PCBP1Q15365 356 aaKnown RBP eCLIP14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 MAPK6Q16659 721 aa14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 TCP11X2Q5H9J9 407 aa14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 SLFN12LQ6IEE8 588 aa14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 SRGAP1Q7Z6B7 1085 aa14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 METTL14Q9HCE5 456 aaKnown RBP14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 LIMA1Q9UHB6 759 aaKnown RBP14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 EVPLQ92817 2033 aa14.54□□□□□ -0.08
VTI1BP1-201ENST00000486325 ADGRA3Q8IWK6 1321 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 DNM1LO00429 736 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 TREHO43280 583 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 ADCY5O95622 1261 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 PIGRP01833 764 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 FAM47CQ5HY64 1035 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 ZPBP2Q6X784 338 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 IRF2BP1Q8IU81 584 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 CREBRFQ8IUR6 639 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 KSR1Q8IVT5 923 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 BICD1Q96G01 975 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 NLRP4Q96MN2 994 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 MKNK1Q9BUB5 465 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 KIFC3Q9BVG8 833 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 AGPAT3Q9NRZ7 376 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 DMAC2Q9NW81 257 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 OGDHLQ9ULD0 1010 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 PHF24Q9UPV7 400 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 FRMD4BQ9Y2L6 1034 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 SCN10AQ9Y5Y9 1956 aa14.53□□□□□ -0.08
VTI1BP1-201ENST00000486325 ACKR2O00590 384 aa14.52□□□□□ -0.09
VTI1BP1-201ENST00000486325 CLIC2O15247 247 aa14.52□□□□□ -0.09
VTI1BP1-201ENST00000486325 SLC16A3O15427 465 aaKnown RBP14.52□□□□□ -0.09
VTI1BP1-201ENST00000486325 ATP1A3P13637 1013 aa14.52□□□□□ -0.09
VTI1BP1-201ENST00000486325 GARTP22102 1010 aa14.52□□□□□ -0.09
VTI1BP1-201ENST00000486325 PSMC2P35998 433 aaKnown RBP14.52□□□□□ -0.09
VTI1BP1-201ENST00000486325 MTIF2P46199 727 aaKnown RBP14.52□□□□□ -0.09
VTI1BP1-201ENST00000486325 LIG4P49917 911 aa14.52□□□□□ -0.09
VTI1BP1-201ENST00000486325 GPC3P51654 580 aa14.52□□□□□ -0.09
VTI1BP1-201ENST00000486325 MARSP56192 900 aaKnown RBP14.52□□□□□ -0.09
VTI1BP1-201ENST00000486325 NLRP11P59045 1033 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms