RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 CTAGE1Q96RT6 745 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 SETD4Q9NVD3 440 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 LMCD1Q9NZU5 365 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 INSL6Q9Y581 213 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 SQORQ9Y6N5 450 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 LAMA4Q16363 1823 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 ZNFX1Q9P2E3 1918 aaKnown RBP6.98□□□□□ -1.29
PTCD3-215ENST00000484203 MBLAC1A4D2B0 266 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-215ENST00000484203 GRXCR1A8MXD5 290 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 DLL1O00548 723 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 NBNO60934 754 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 MICAL2O94851 1124 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 GJB5O95377 273 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 DEXIO95424 95 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 CA3P07451 260 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 PDIA3P30101 505 aaKnown RBP6.98□□□□□ -1.29
PTCD3-215ENST00000484203 CDC27P30260 824 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 CIITAP33076 1130 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 MAP2K3P46734 347 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 IDH3AP50213 366 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 STAT5BP51692 787 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 USP11P51784 963 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 ACTR2P61160 394 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 WDR5P61964 334 aaKnown RBP6.98□□□□□ -1.29
PTCD3-215ENST00000484203 ADAM17P78536 824 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 SP4Q02446 784 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 SSRP1Q08945 709 aaKnown RBP6.98□□□□□ -1.29
PTCD3-215ENST00000484203 APOBRQ0VD83 1088 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 GRIK4Q16099 956 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 PLEKHG4Q58EX7 1191 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 FAM26DQ5JW98 314 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 ZNF746Q6NUN9 644 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-215ENST00000484203 MIS18BP1Q6P0N0 1132 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 RAB11FIP4Q86YS3 637 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 TREML1Q86YW5 311 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 SMAP1Q8IYB5 467 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-215ENST00000484203 WASF1Q92558 559 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 VWCEQ96DN2 955 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 TCEANC2Q96MN5 208 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 NAP1L4Q99733 375 aaKnown RBP6.98□□□□□ -1.29
PTCD3-215ENST00000484203 FTHL17Q9BXU8 183 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 NKX2-4Q9H2Z4 354 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 AGO4Q9HCK5 861 aaKnown RBP6.98□□□□□ -1.29
PTCD3-215ENST00000484203 TUBE1Q9UJT0 475 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 HCN2Q9UL51 889 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 CEP131Q9UPN4 1083 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 PLXNA1Q9UIW2 1896 aa6.98□□□□□ -1.29
PTCD3-215ENST00000484203 ALPK3Q96L96 1907 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 FRMPD3Q5JV73 1810 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 CHD9Q3L8U1 2897 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 GSTTP1A0A1W2PQM5 241 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 RNF225M0QZC1 329 aaPredicted RBP6.97□□□□□ -1.29
PTCD3-215ENST00000484203 IPO5O00410 1097 aaKnown RBP6.97□□□□□ -1.29
PTCD3-215ENST00000484203 C2CD2LO14523 706 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 TREHO43280 583 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 HBP1O60381 514 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 SORBS3O60504 671 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 ATP9AO75110 1047 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 PSAPP07602 524 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 RABGGTBP53611 331 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 NLRP5P59047 1200 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 ZNF200P98182 395 aaPredicted RBP6.97□□□□□ -1.29
PTCD3-215ENST00000484203 CDC42EP1Q00587 391 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 KCNMA1Q12791 1236 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 PLA2G4DQ86XP0 818 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 DBF4BQ8NFT6 615 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 RDM1Q8NG50 284 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 LMBR1Q8WVP7 490 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 FAM167AQ96KS9 214 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 TGS1Q96RS0 853 aaKnown RBP6.97□□□□□ -1.29
PTCD3-215ENST00000484203 RIT2Q99578 217 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 ZNF577Q9BSK1 485 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 SLC26A6Q9BXS9 759 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 IFIH1Q9BYX4 1025 aaKnown RBP6.97□□□□□ -1.29
PTCD3-215ENST00000484203 PRDM12Q9H4Q4 367 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 PDRG1Q9NUG6 133 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 DMGDHQ9UI17 866 aaKnown RBP6.97□□□□□ -1.29
PTCD3-215ENST00000484203 COG5Q9UP83 839 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 YBX2Q9Y2T7 364 aaKnown RBP6.97□□□□□ -1.29
PTCD3-215ENST00000484203 RWDD3Q9Y3V2 267 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 PCDHA2Q9Y5H9 948 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 PCDHA10Q9Y5I2 948 aa6.97□□□□□ -1.29
PTCD3-215ENST00000484203 COL1A2P08123 1366 aa6.96□□□□□ -1.29
PTCD3-215ENST00000484203 LRRC37A2A6NM11 1700 aa6.96□□□□□ -1.29
PTCD3-215ENST00000484203 IGKV6D-21A0A0A0MT36 114 aa6.96□□□□□ -1.3
PTCD3-215ENST00000484203 SMIM35A0A1B0GVV1 85 aa6.96□□□□□ -1.3
PTCD3-215ENST00000484203 WDR64B1ANS9 1081 aa6.96□□□□□ -1.3
PTCD3-215ENST00000484203 MAGEB2O15479 319 aa6.96□□□□□ -1.3
PTCD3-215ENST00000484203 INSRRP14616 1297 aa6.96□□□□□ -1.3
PTCD3-215ENST00000484203 MARK3P27448 753 aa6.96□□□□□ -1.3
PTCD3-215ENST00000484203 TMOD1P28289 359 aa6.96□□□□□ -1.3
PTCD3-215ENST00000484203 SFNP31947 248 aa6.96□□□□□ -1.3
PTCD3-215ENST00000484203 JAK3P52333 1124 aa6.96□□□□□ -1.3
PTCD3-215ENST00000484203 MRPS5P82675 430 aaKnown RBP6.96□□□□□ -1.3
PTCD3-215ENST00000484203 TAP1Q03518 808 aa6.96□□□□□ -1.3
PTCD3-215ENST00000484203 GPNMBQ14956 572 aa6.96□□□□□ -1.3
PTCD3-215ENST00000484203 NTRK3Q16288 839 aa6.96□□□□□ -1.3
PTCD3-215ENST00000484203 PKN1Q16512 942 aa6.96□□□□□ -1.3
PTCD3-215ENST00000484203 PTPROQ16827 1216 aa6.96□□□□□ -1.3
PTCD3-215ENST00000484203 ZNF484Q5JVG2 852 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms