RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 TCP11Q8WWU5 503 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 ERO1AQ96HE7 468 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 ZNF830Q96NB3 372 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-226ENST00000483656 JPH2Q9BR39 696 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-226ENST00000483656 CBWD1Q9BRT8 395 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 NOC4LQ9BVI4 516 aaKnown RBP11.08□□□□□ -0.64
HDAC6-226ENST00000483656 KCNF1Q9H3M0 494 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.08□□□□□ -0.64
HDAC6-226ENST00000483656 IMPACTQ9P2X3 320 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 KCNG1Q9UIX4 513 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 USP20Q9Y2K6 914 aa11.08□□□□□ -0.64
HDAC6-226ENST00000483656 LRRIQ4A6NIV6 560 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 H0YCG3 227 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 SLC16A3O15427 465 aaKnown RBP11.07□□□□□ -0.64
HDAC6-226ENST00000483656 MAGEB2O15479 319 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 ADAMTS4O75173 837 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 GNRH1P01148 92 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 PIGRP01833 764 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 TPM3P06753 285 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 SMIM10L2AP0DMW4 78 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 SMIM10L2BP0DMW5 78 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 PRKCSHP14314 528 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-226ENST00000483656 CNGA1P29973 690 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 CYP2J2P51589 502 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 SNRPFP62306 86 aaKnown RBP11.07□□□□□ -0.64
HDAC6-226ENST00000483656 ADAM17P78536 824 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 PURAQ00577 322 aaKnown RBP11.07□□□□□ -0.64
HDAC6-226ENST00000483656 UBXN1Q04323 297 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 MFSD10Q14728 455 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 KIAA0753Q2KHM9 967 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 CCDC40Q4G0X9 1142 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 CEP135Q66GS9 1140 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 CDCA2Q69YH5 1023 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-226ENST00000483656 SPECC1LQ69YQ0 1117 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 ARMCX5Q6P1M9 558 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 DEPTORQ8TB45 409 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 CACTINQ8WUQ7 758 aaKnown RBP11.07□□□□□ -0.64
HDAC6-226ENST00000483656 PSPC1Q8WXF1 523 aaKnown RBP11.07□□□□□ -0.64
HDAC6-226ENST00000483656 CCDC113Q9H0I3 377 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 NDST4Q9H3R1 872 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 PCIF1Q9H4Z3 704 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 TMEM134Q9H6X4 195 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 SETD4Q9NVD3 440 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 CGNQ9P2M7 1197 aaKnown RBP11.07□□□□□ -0.64
HDAC6-226ENST00000483656 TSKSQ9UJT2 592 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 EXOC7Q9UPT5 735 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 SIP14410 1827 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 ITIH6Q6UXX5 1313 aa11.07□□□□□ -0.64
HDAC6-226ENST00000483656 A0A1W2PQC6 194 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 RRN3P2A6NIE6 340 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 TTLL13PA6NNM8 815 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 GOLGA6L6A8MZA4 724 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 RNF225M0QZC1 329 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-226ENST00000483656 PGK1P00558 417 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 HMGCRP04035 888 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 SRGAP2CP0DJJ0 459 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 KLK7P49862 253 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 DNM2P50570 870 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 MCCD1P59942 119 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-226ENST00000483656 GOLGA8FQ08AF8 430 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 GOLGA8DPQ0D2H9 430 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 MXD4Q14582 209 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-226ENST00000483656 CCSAPQ6IQ19 270 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-226ENST00000483656 KIAA0319LQ8IZA0 1049 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 METTL13Q8N6R0 699 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 KLHDC9Q8NEP7 349 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 PXYLP1Q8TE99 480 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 LMBR1Q8WVP7 490 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 ZNF668Q96K58 619 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-226ENST00000483656 MKNK1Q9BUB5 465 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 HAPLN2Q9GZV7 340 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 HSPBP1Q9NZL4 362 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 STYXL1Q9Y6J8 313 aa11.06□□□□□ -0.64
HDAC6-226ENST00000483656 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.06□□□□□ -0.64
HDAC6-226ENST00000483656 MBLAC1A4D2B0 266 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-226ENST00000483656 K7ERI5 159 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 ASAP2O43150 1006 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 MSCO60682 206 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 KPNA6O60684 536 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 C6orf222P0C671 652 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-226ENST00000483656 RARBP10826 455 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 EPB41P11171 864 aaKnown RBP11.05□□□□□ -0.64
HDAC6-226ENST00000483656 SCP2P22307 547 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 HOXC8P31273 242 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 ABCD1P33897 745 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 PSMC2P35998 433 aaKnown RBP11.05□□□□□ -0.64
HDAC6-226ENST00000483656 PTENP60484 403 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 ZNF200P98182 395 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-226ENST00000483656 KCNMA1Q12791 1236 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 LRMPQ12912 555 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 SYCP1Q15431 976 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 BRDTQ58F21 947 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-226ENST00000483656 GNASQ5JWF2 1037 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 IFNLR1Q8IU57 520 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-226ENST00000483656 RHPN2Q8IUC4 686 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 FAM186BQ8IYM0 893 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 CCDC155Q8N6L0 562 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 RNF149Q8NC42 400 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 RETREG2Q8NC44 543 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 RAET1EQ8TD07 263 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms