RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 CAPN6Q9Y6Q1 641 aa8.89□□□□□ -0.99
SORT1-205ENST00000483508 PLXNA1Q9UIW2 1896 aa8.89□□□□□ -0.99
SORT1-205ENST00000483508 A0A1W2PQ45 241 aaPredicted RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 A0A1W2PQY0 241 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 TRIM43BA6NCK2 446 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 F5H6K3 240 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 PDE2AO00408 941 aaPredicted RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 CALUO43852 315 aaPredicted RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 IGHA2P01877 340 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 KRT18P05783 430 aaKnown RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 PLEKP08567 350 aaPredicted RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 C6orf222P0C671 652 aaPredicted RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 TAL1P17542 331 aaPredicted RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 CYP11B2P19099 503 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 SLC1A4P43007 532 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 EPHB4P54760 987 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 SMAD3P84022 425 aaKnown RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 APBA1Q02410 837 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 FPGSQ05932 587 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 KLRC3Q07444 240 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 C2orf54Q08AI8 447 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 SNX17Q15036 470 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 ASIC2Q16515 512 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 CDC37Q16543 378 aaPredicted RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 ECM1Q16610 540 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 IFI16Q16666 785 aaKnown RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 CFAP221Q4G0U5 840 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 TDRD12Q587J7 1177 aaKnown RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 HERC4Q5GLZ8 1057 aaPredicted RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 C1orf53Q5VUE5 145 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 SLFN13Q68D06 897 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 EMBQ6PCB8 327 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 FRMD5Q7Z6J6 570 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 GMCL1P1Q8NEA9 526 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 SPATA4Q8NEY3 305 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 MAFAQ8NHW3 353 aaPredicted RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 TRIM43Q96BQ3 446 aaPredicted RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 GUCD1Q96NT3 240 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 CDX2Q99626 313 aaPredicted RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 TSEN34Q9BSV6 310 aaKnown RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 SELENOOQ9BVL4 669 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 AMNQ9BXJ7 453 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 KCTD10Q9H3F6 313 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 SUGCTQ9HAC7 445 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 MLXIPQ9HAP2 919 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 METTL14Q9HCE5 456 aaKnown RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 PLCB1Q9NQ66 1216 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 FEM1BQ9UK73 627 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 ZNF214Q9UL59 606 aaPredicted RBP8.88□□□□□ -0.99
SORT1-205ENST00000483508 TFR2Q9UP52 801 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 KIAA1024Q9UPX6 916 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 TRAF3IP3Q9Y228 551 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 DAAM1Q9Y4D1 1078 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 PCDHA1Q9Y5I3 950 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 MYH11P35749 1972 aa8.88□□□□□ -0.99
SORT1-205ENST00000483508 LTBP2Q14767 1821 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 MROH7Q68CQ1 1323 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 SYNGAP1Q96PV0 1343 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 SMCHD1A6NHR9 2005 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 MOXD2PA6NHM9 499 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 A6NNZ2 444 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 GOLGA8KD6RF30 607 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 E9PMD0 336 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 PDXKO00764 312 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 ZNF185O15231 689 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 SLC16A3O15427 465 aaKnown RBP8.87□□□□□ -0.99
SORT1-205ENST00000483508 TLR3O15455 904 aaKnown RBP8.87□□□□□ -0.99
SORT1-205ENST00000483508 OPA1O60313 960 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 RNF40O75150 1001 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 NOL4O94818 638 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 PRPF6O94906 941 aaKnown RBP8.87□□□□□ -0.99
SORT1-205ENST00000483508 NDUFB10O96000 172 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 SSBP05455 408 aaKnown RBP eCLIP8.87□□□□□ -0.99
SORT1-205ENST00000483508 FOSL2P15408 326 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 GAP43P17677 238 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 RPA1P27694 616 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 CIITAP33076 1130 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 SREBF1P36956 1147 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 ACLYP53396 1101 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 SLC12A3P55017 1021 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 ARHGAP4P98171 946 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 NAB2Q15742 525 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 KCNA10Q16322 511 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 SLC18A3Q16572 532 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 BMT2Q1RMZ1 405 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 TUBB8Q3ZCM7 444 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 KLHDC7AQ5VTJ3 777 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 ALS2CLQ60I27 953 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 CCDC174Q6PII3 467 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 KCTD1Q719H9 257 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 FMNL3Q8IVF7 1028 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 SYT2Q8N9I0 419 aaPredicted RBP8.87□□□□□ -0.99
SORT1-205ENST00000483508 PCSK9Q8NBP7 692 aaKnown RBP8.87□□□□□ -0.99
SORT1-205ENST00000483508 ETNPPLQ8TBG4 499 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 SCFD1Q8WVM8 642 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 CRYGNQ8WXF5 182 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 MYLIPQ8WY64 445 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.87□□□□□ -0.99
SORT1-205ENST00000483508 CAVIN3Q969G5 261 aa8.87□□□□□ -0.99
SORT1-205ENST00000483508 EEF2KMTQ96G04 330 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms