RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 LIG1P18858 919 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 NCLP19338 710 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 SFPQP23246 707 aaKnown RBP eCLIP11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 CDC42EP1Q00587 391 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 LAMTOR4Q0VGL1 99 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 PKP1Q13835 747 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 TFDP1Q14186 410 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 DHX8Q14562 1220 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 SPECC1Q5M775 1068 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 PADI6Q6TGC4 694 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 CATSPER4Q7RTX7 472 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 RNF149Q8NC42 400 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 RNF169Q8NCN4 708 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 PHOSPHO2Q8TCD6 241 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 PRPF31Q8WWY3 499 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 USP28Q96RU2 1077 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 ADAM2Q99965 735 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 FTHL17Q9BXU8 183 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 ADAMTS10Q9H324 1103 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 CERS4Q9HA82 394 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 ERVK-5Q9HDB9 667 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 GPRC5CQ9NQ84 441 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 NPDC1Q9NQX5 325 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 DBR1Q9UK59 544 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 SQORQ9Y6N5 450 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 ENPP3O14638 875 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 MGEA5O60502 916 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 XRCC6P12956 609 aaKnown RBP eCLIP11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 PDIA4P13667 645 aaKnown RBP11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 DARSP14868 501 aaKnown RBP11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 MUTP22033 750 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 EIF4BP23588 611 aaKnown RBP11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 LONP1P36776 959 aaKnown RBP11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 TXLNAP40222 546 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 PHKA2P46019 1235 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 GRIN1Q05586 938 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 RAD51AP2Q09MP3 1159 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 MXD4Q14582 209 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 TMEM132AQ24JP5 1023 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 PAN2Q504Q3 1202 aaKnown RBP11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 ZNF410Q86VK4 478 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 MCPH1Q8NEM0 835 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 ASAP3Q8TDY4 903 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 LINC01599Q8WXQ3 324 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 AK8Q96MA6 479 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 CLIC6Q96NY7 704 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 MMTAG2Q9BU76 263 aaKnown RBP11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 ADAM33Q9BZ11 813 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 INO80BQ9C086 356 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 NT5C3AQ9H0P0 336 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 TMX1Q9H3N1 280 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 ZNF576Q9H609 170 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 POLD4Q9HCU8 107 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 XPNPEP1Q9NQW7 623 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 MTUS1Q9ULD2 1270 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 PIN4Q9Y237 131 aaKnown RBP11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 STXBP5LQ9Y2K9 1186 aa11.09□□□□□ -0.63
SPTLC1-206ENST00000482632 KIAA1671Q9BY89 1806 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 LCHNA4D1U4 455 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 INO80B-WBP1J3KQ70 363 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 ASAP2O43150 1006 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 ERLIN2O94905 339 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 GJB5O95377 273 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 EYA4O95677 639 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 STAG3L1P0CL83 205 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 FECHP22830 423 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 GRB10Q13322 594 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 KARSQ15046 597 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 PTPAQ15257 358 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 C6orf132Q5T0Z8 1188 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 TWF2Q6IBS0 349 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 IFT74Q96LB3 600 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 RAD9AQ99638 391 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 CSRNP2Q9H175 543 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 SEMA6BQ9H3T3 888 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 INSL6Q9Y581 213 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 PCDHB7Q9Y5E2 793 aa11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 FNDC1Q4ZHG4 1894 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1-206ENST00000482632 SPTLC2O15270 562 aa11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 KRT18P05783 430 aaKnown RBP11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 PLCG1P19174 1290 aa11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 GLRA2P23416 452 aa11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 CAPSQ13938 189 aa11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 LONRF3Q496Y0 759 aa11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 SPOUT1Q5T280 376 aaKnown RBP11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 KCNK18Q7Z418 384 aa11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 SRGAP1Q7Z6B7 1085 aa11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 RTN4RL1Q86UN2 441 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 ZBTB8OSQ8IWT0 167 aa11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 ZNF687Q8N1G0 1237 aa11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 ARNTL2Q8WYA1 636 aa11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 SYMPKQ92797 1274 aaKnown RBP11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 TOP1MTQ969P6 601 aa11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 EPSTI1Q96J88 318 aa11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 PNMA5Q96PV4 448 aa11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 GAS2L1Q99501 681 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 TTYH1Q9H313 450 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 PRDM12Q9H4Q4 367 aa11.07□□□□□ -0.64
SPTLC1-206ENST00000482632 PRDM6Q9NQX0 595 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms