RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 LRRC55Q6ZSA7 311 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 IFNLR1Q8IU57 520 aaPredicted RBP16.71■□□□□ 0.27
TDP2-205ENST00000480495 C4orf32Q8N8J7 132 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 HELQQ8TDG4 1101 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 PGBD4Q96DM1 585 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 ZNF558Q96NG5 402 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 MINDY3Q9H8M7 445 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 FAM105AQ9NUU6 356 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 CLDND1Q9NY35 253 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 HCSTQ9UBK5 93 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 LZTS1Q9Y250 596 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 STK24Q9Y6E0 443 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 XIRP2A4UGR9 3374 aa16.7■□□□□ 0.26
TDP2-205ENST00000480495 CARNS1A5YM72 827 aa16.7■□□□□ 0.26
TDP2-205ENST00000480495 LAD1O00515 517 aa16.7■□□□□ 0.26
TDP2-205ENST00000480495 MED24O75448 989 aa16.7■□□□□ 0.26
TDP2-205ENST00000480495 AXLP30530 894 aa16.7■□□□□ 0.26
TDP2-205ENST00000480495 PLCB3Q01970 1234 aa16.7■□□□□ 0.26
TDP2-205ENST00000480495 PDIA5Q14554 519 aa16.7■□□□□ 0.26
TDP2-205ENST00000480495 KCNT2Q6UVM3 1135 aa16.7■□□□□ 0.26
TDP2-205ENST00000480495 MCPH1Q8NEM0 835 aa16.7■□□□□ 0.26
TDP2-205ENST00000480495 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.7■□□□□ 0.26
TDP2-205ENST00000480495 NFKBIZQ9BYH8 718 aa16.7■□□□□ 0.26
TDP2-205ENST00000480495 RAB34Q9BZG1 259 aa16.7■□□□□ 0.26
TDP2-205ENST00000480495 TLR9Q9NR96 1032 aa16.7■□□□□ 0.26
TDP2-205ENST00000480495 PUF60Q9UHX1 559 aaKnown RBP16.7■□□□□ 0.26
TDP2-205ENST00000480495 KIAA1671Q9BY89 1806 aa16.7■□□□□ 0.26
TDP2-205ENST00000480495 USO1O60763 962 aaKnown RBP16.69■□□□□ 0.26
TDP2-205ENST00000480495 ERLIN2O94905 339 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 GJB2P29033 226 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 HOXA11P31270 313 aaPredicted RBP16.69■□□□□ 0.26
TDP2-205ENST00000480495 IRS1P35568 1242 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 TOB1P50616 345 aaPredicted RBP16.69■□□□□ 0.26
TDP2-205ENST00000480495 KRT17Q04695 432 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 NCBP1Q09161 790 aaKnown RBP16.69■□□□□ 0.26
TDP2-205ENST00000480495 PTGDRQ13258 359 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 NBR1Q14596 966 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 MCTP1Q6DN14 999 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 GLB1LQ6UWU2 654 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 EP400NLQ6ZTU2 488 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 MRPL10Q7Z7H8 261 aaKnown RBP16.69■□□□□ 0.26
TDP2-205ENST00000480495 ASAP3Q8TDY4 903 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 MRPS27Q92552 414 aaKnown RBP16.69■□□□□ 0.26
TDP2-205ENST00000480495 CCDC51Q96ER9 411 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 SPG21Q9NZD8 308 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 LRWD1Q9UFC0 647 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 FAM50BQ9Y247 325 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.69■□□□□ 0.26
TDP2-205ENST00000480495 PCDHB6Q9Y5E3 794 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 PCDHB2Q9Y5E7 798 aa16.69■□□□□ 0.26
TDP2-205ENST00000480495 ARID2Q68CP9 1835 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 BRWD1Q9NSI6 2320 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 A0A087WWV3 80 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 FSD2A1L4K1 749 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 GRXCR2A6NFK2 248 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 H3BQ06 376 aaPredicted RBP16.68■□□□□ 0.26
TDP2-205ENST00000480495 H3BQV1 296 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 CSPG5O95196 566 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 GLRA2P23416 452 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 CAPSQ13938 189 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 RILPL1Q5EBL4 403 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 PTCRAQ6ISU1 281 aaPredicted RBP16.68■□□□□ 0.26
TDP2-205ENST00000480495 POTEGQ6S5H5 508 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 CNNM3Q8NE01 707 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 MICAL1Q8TDZ2 1067 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 LPPQ93052 612 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 NECAB3Q96P71 396 aaPredicted RBP16.68■□□□□ 0.26
TDP2-205ENST00000480495 POLR3FQ9H1D9 316 aaPredicted RBP16.68■□□□□ 0.26
TDP2-205ENST00000480495 IGFLR1Q9H665 355 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 SMC3Q9UQE7 1217 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 CNTNAP2Q9UHC6 1331 aa16.68■□□□□ 0.26
TDP2-205ENST00000480495 ARHGEF35A5YM69 484 aa16.67■□□□□ 0.26
TDP2-205ENST00000480495 INO80B-WBP1J3KQ70 363 aa16.67■□□□□ 0.26
TDP2-205ENST00000480495 TSPAN1O60635 241 aa16.67■□□□□ 0.26
TDP2-205ENST00000480495 LTBRP36941 435 aa16.67■□□□□ 0.26
TDP2-205ENST00000480495 CCT6AP40227 531 aaKnown RBP16.67■□□□□ 0.26
TDP2-205ENST00000480495 PRPHP41219 470 aa16.67■□□□□ 0.26
TDP2-205ENST00000480495 ALDH7A1P49419 539 aaKnown RBP16.67■□□□□ 0.26
TDP2-205ENST00000480495 ADAM15Q13444 863 aa16.67■□□□□ 0.26
TDP2-205ENST00000480495 NOMO2Q5JPE7 1267 aa16.67■□□□□ 0.26
TDP2-205ENST00000480495 UBXN11Q5T124 520 aa16.67■□□□□ 0.26
TDP2-205ENST00000480495 NOTUMQ6P988 496 aa16.67■□□□□ 0.26
TDP2-205ENST00000480495 ADGRD2Q7Z7M1 963 aa16.67■□□□□ 0.26
TDP2-205ENST00000480495 SLC39A11Q8N1S5 342 aa16.67■□□□□ 0.26
TDP2-205ENST00000480495 EFHBQ8N7U6 833 aa16.67■□□□□ 0.26
TDP2-205ENST00000480495 IGSF22Q8N9C0 903 aa16.67■□□□□ 0.26
TDP2-205ENST00000480495 CDCA3Q99618 268 aaPredicted RBP16.67■□□□□ 0.26
TDP2-205ENST00000480495 UBN1Q9NPG3 1134 aa16.67■□□□□ 0.26
TDP2-205ENST00000480495 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.67■□□□□ 0.26
TDP2-205ENST00000480495 FSCN2O14926 492 aa16.66■□□□□ 0.26
TDP2-205ENST00000480495 OFD1O75665 1012 aa16.66■□□□□ 0.26
TDP2-205ENST00000480495 CYP11B2P19099 503 aa16.66■□□□□ 0.26
TDP2-205ENST00000480495 NCLP19338 710 aaKnown RBP16.66■□□□□ 0.26
TDP2-205ENST00000480495 GTF2F1P35269 517 aaKnown RBP eCLIP16.66■□□□□ 0.263e-9■■■■■ 38.5
TDP2-205ENST00000480495 NRIP1P48552 1158 aa16.66■□□□□ 0.26
TDP2-205ENST00000480495 BCAR1P56945 870 aa16.66■□□□□ 0.26
TDP2-205ENST00000480495 MBTD1Q05BQ5 628 aa16.66■□□□□ 0.26
TDP2-205ENST00000480495 LONRF3Q496Y0 759 aa16.66■□□□□ 0.26
TDP2-205ENST00000480495 PADI6Q6TGC4 694 aa16.66■□□□□ 0.26
TDP2-205ENST00000480495 URGCPQ8TCY9 931 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms