RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 GPR75-ASB3A0A0A6YYF3 556 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 DDX3XO00571 662 aaKnown RBP eCLIP11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 CCND1P24385 295 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 GALCP54803 685 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 PLTPP55058 493 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 ORC2Q13416 577 aaPredicted RBP11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 IFI16Q16666 785 aaKnown RBP11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 ANKRD20A2Q5SQ80 823 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 ANKRD20A1Q5TYW2 823 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 ANKRD20A3Q5VUR7 823 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 AADACL2Q6P093 401 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 TMC3Q7Z5M5 1100 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 CATSPER3Q86XQ3 398 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 RNF168Q8IYW5 571 aaPredicted RBP11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 ZNF510Q9Y2H8 683 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 C6orf229H3BNL8 230 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 RIMBP2O15034 1052 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 MAP3K13O43283 966 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 PPIP5K2O43314 1243 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 CTNND1O60716 968 aaKnown RBP11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 SHBGP04278 402 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 KRT13P13646 458 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 SLCO1A2P46721 670 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 ZNF543Q08ER8 600 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 KNOP1Q1ED39 458 aaKnown RBP11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 SHROOM1Q2M3G4 852 aaPredicted RBP11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 VPS36Q86VN1 386 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 LMNTD2Q8IXW0 634 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 CNBD1Q8NA66 436 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 CCT6BQ92526 530 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 NAF1Q96HR8 494 aaKnown RBP11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 BHMT2Q9H2M3 363 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 TMOD4Q9NZQ9 345 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 PPP1R9AQ9ULJ8 1098 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 ASB3Q9Y575 518 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 PCDHA1Q9Y5I3 950 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 KDM3AQ9Y4C1 1321 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 IRS2Q9Y4H2 1338 aa11.91□□□□□ -0.5
LRRFIP1-211ENST00000478958 LGR5O75473 907 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 HOXD13P35453 343 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 GTF2IP78347 998 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 MRPS35P82673 323 aaKnown RBP11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 SEPT2Q15019 361 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 ARHGAP44Q17R89 818 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 USH1GQ495M9 461 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 LRIG3Q6UXM1 1119 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 RDH13Q8NBN7 331 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 FMO2Q99518 471 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 PREBQ9HCU5 417 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 SNX24Q9Y343 169 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 TMEM110-MUSTN1A8MSY1 372 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 TTLL1O95922 423 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 GRAPQ13588 217 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 GIT2Q14161 759 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 EMC10Q5UCC4 262 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 NT5DC3Q86UY8 548 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 GRAPLQ8TC17 118 aaPredicted RBP11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 PIGOQ8TEQ8 1089 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 OPTNQ96CV9 577 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 MXD3Q9BW11 206 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 UNC45AQ9H3U1 944 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 SPATA7Q9P0W8 599 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 AMFRQ9UKV5 643 aa11.9□□□□□ -0.5
LRRFIP1-211ENST00000478958 F8VZ95 297 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 ZBTB5O15062 677 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 LRRN2O75325 713 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 NR3C1P04150 777 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 VIMP08670 466 aaKnown RBP11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 NAT1P18440 290 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 IFNAR2P48551 515 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 SCNN1DP51172 638 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 SLC12A3P55017 1021 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 IKQ13123 557 aaPredicted RBP11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 BIRC3Q13489 604 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 UBAP2Q5T6F2 1119 aaKnown RBP11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 GKAP1Q5VSY0 366 aaPredicted RBP11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 LCA5Q86VQ0 697 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 SLC35G2Q8TBE7 412 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 ERVK-5Q9HDB9 667 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 DDX4Q9NQI0 724 aaKnown RBP11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 GGT7Q9UJ14 662 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 DNM3Q9UQ16 869 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 IGSF9BQ9UPX0 1349 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 LAMB1P07942 1786 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 SMARCA1P28370 1054 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 MARSP56192 900 aaKnown RBP11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 EDRF1Q3B7T1 1238 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 ZC2HC1CQ53FD0 456 aaPredicted RBP11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 ARHGAP27Q6ZUM4 889 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 CYP2W1Q8TAV3 490 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 SLC35C1Q96A29 364 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 ANO3Q9BYT9 981 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 ATXN10Q9UBB4 475 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 BZW2Q9Y6E2 419 aaKnown RBP11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 ABCA3Q99758 1704 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 CFAP73A6NFT4 308 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 CHMP2AO43633 222 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 ATP2A2P16615 1042 aaKnown RBP11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 PLCG2P16885 1265 aa11.89□□□□□ -0.51
LRRFIP1-211ENST00000478958 STAT1P42224 750 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms