RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 PPHLN1Q8NEY8 458 aaKnown RBP5.07□□□□□ -1.6
VPS13D-207ENST00000476169 PPP1R35Q8TAP8 253 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 CALML6Q8TD86 181 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 ALG3Q92685 438 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 PGBD4Q96DM1 585 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 DDX11Q96FC9 970 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 INTS4Q96HW7 963 aaKnown RBP5.07□□□□□ -1.6
VPS13D-207ENST00000476169 GTPBP4Q9BZE4 634 aaKnown RBP5.07□□□□□ -1.6
VPS13D-207ENST00000476169 SLC6A17Q9H1V8 727 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 ARFGAP3Q9NP61 516 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 SLC39A2Q9NP94 309 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 TRMT13Q9NUP7 481 aaKnown RBP5.07□□□□□ -1.6
VPS13D-207ENST00000476169 RTEL1Q9NZ71 1219 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 FNIP2Q9P278 1114 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 DPP7Q9UHL4 492 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 NUMBLQ9Y6R0 609 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 hCG_1642624A0A1W2PR95 340 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 OR14I1A6ND48 311 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 NFIBO00712 420 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 ADAMTS4O75173 837 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 MPIG6BO95866 241 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 SLC5A1P13866 664 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 CHKAP35790 457 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 CASP2P42575 452 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 MAPK9P45984 424 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 RGS3P49796 1198 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 FAM193AP78312 1265 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 SPIDRQ14159 915 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 ELF2Q15723 593 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 MUM1Q2TAK8 710 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 JAKMIP3Q5VZ66 844 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 CYB5RLQ6IPT4 315 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 ZNF280DQ6N043 979 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 DARS2Q6PI48 645 aaKnown RBP5.06□□□□□ -1.6
VPS13D-207ENST00000476169 ZC3H14Q6PJT7 736 aaKnown RBP5.06□□□□□ -1.6
VPS13D-207ENST00000476169 UNQ6494/PRO21346Q6UXR6 183 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 KANSL1Q7Z3B3 1105 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 AMIGO3Q86WK7 504 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 SPATA5Q8NB90 893 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 FLAD1Q8NFF5 587 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 DIS3LQ8TF46 1054 aaKnown RBP5.06□□□□□ -1.6
VPS13D-207ENST00000476169 RPGRQ92834 1020 aaKnown RBP5.06□□□□□ -1.6
VPS13D-207ENST00000476169 HPS3Q969F9 1004 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 KIRREL1Q96J84 757 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 MPP4Q96JB8 637 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 SGCZQ96LD1 299 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 NEUROD6Q96NK8 337 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 PRDM12Q9H4Q4 367 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 IFT122Q9HBG6 1241 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 JADE2Q9NQC1 790 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 INCENPQ9NQS7 918 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 KLHL14Q9P2G3 628 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 TUBD1Q9UJT1 453 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 PCDHGB3Q9Y5G1 929 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 SLC4A7Q9Y6M7 1214 aa5.06□□□□□ -1.6
VPS13D-207ENST00000476169 MYPNQ86TC9 1320 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 CFAP69A5D8W1 941 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 ZNF839A8K0R7 811 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 PRRT4C9JH25 899 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 FAM227AF5H4B4 570 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 CCER2I3L3R5 266 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 DTNBO60941 627 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 PCDH8O95206 1070 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 AGR2O95994 175 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 PFKMP08237 780 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 ENO2P09104 434 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-207ENST00000476169 SRGNP10124 158 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 ITGB7P26010 798 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 SLC16A1P53985 500 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 BCAR1P56945 870 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 NKX3-2P78367 333 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 CDK17Q00537 523 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 BTKQ06187 659 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 PPARAQ07869 468 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 SIM2Q14190 667 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-207ENST00000476169 TRIM25Q14258 630 aaKnown RBP5.05□□□□□ -1.6
VPS13D-207ENST00000476169 ATAT1Q5SQI0 421 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 VASNQ6EMK4 673 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 LRSAM1Q6UWE0 723 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 OVCH2Q7RTZ1 564 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 MAATS1Q7Z4T9 603 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 ZC3H18Q86VM9 953 aaKnown RBP5.05□□□□□ -1.6
VPS13D-207ENST00000476169 THEMISQ8N1K5 641 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-207ENST00000476169 FAM43AQ8N2R8 423 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 WDR48Q8TAF3 677 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 ATXN2LQ8WWM7 1075 aaKnown RBP5.05□□□□□ -1.6
VPS13D-207ENST00000476169 RSAD2Q8WXG1 361 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 SKA1Q96BD8 255 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 AMNQ9BXJ7 453 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 ACE2Q9BYF1 805 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-207ENST00000476169 VPS11Q9H270 941 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 GALNT8Q9NY28 637 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 HSPBP1Q9NZL4 362 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 RBPJLQ9UBG7 517 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 NRBP1Q9UHY1 535 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 FBXO2Q9UK22 296 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-207ENST00000476169 TMPRSS11EQ9UL52 423 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 USP18Q9UMW8 372 aa5.05□□□□□ -1.6
VPS13D-207ENST00000476169 LRRC10BA6NIK2 292 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 ABLIM1O14639 778 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms