RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TXLNGYQ9BZA5 131 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 PCIF1Q9H4Z3 704 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 GOPCQ9HD26 462 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 DNM1LO00429 736 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 ECE2O60344 883 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 CAND2O75155 1236 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 RASSF9O75901 435 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 CCDC91Q7Z6B0 441 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 FAM178BQ8IXR5 827 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 INTS2Q9H0H0 1204 aaKnown RBP22.84■■□□□ 1.25
COL18A1-207ENST00000473212 CD248Q9HCU0 757 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 SLC40A1Q9NP59 571 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 ACP6Q9NPH0 428 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 FOXN3O00409 490 aaPredicted RBP22.83■■□□□ 1.25
COL18A1-207ENST00000473212 PPP1R12BO60237 982 aaPredicted RBP22.83■■□□□ 1.25
COL18A1-207ENST00000473212 SHBGP04278 402 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 MARCKSL1P49006 195 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 ODR4Q5SWX8 454 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 ZNF746Q6NUN9 644 aaPredicted RBP22.83■■□□□ 1.25
COL18A1-207ENST00000473212 CPNE8Q86YQ8 564 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 CACNA2D3Q8IZS8 1091 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 NCAPGQ9BPX3 1015 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 PNMA2Q9UL42 364 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 DAAM1Q9Y4D1 1078 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 COL11A2P13942 1736 aaPredicted RBP22.83■■□□□ 1.25
COL18A1-207ENST00000473212 C5orf60A6NFR6 353 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 CYP3A4P08684 503 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 DUPD1Q68J44 220 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 CPLX4Q7Z7G2 160 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 COL23A1Q86Y22 540 aaPredicted RBP22.83■■□□□ 1.25
COL18A1-207ENST00000473212 TATDN2Q93075 761 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 ELMO3Q96BJ8 720 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 TLCD1Q96CP7 247 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 CSRNP1Q96S65 589 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 ERP44Q9BS26 406 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 UNC45AQ9H3U1 944 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 STK24Q9Y6E0 443 aa22.83■■□□□ 1.25
COL18A1-207ENST00000473212 AFF2P51816 1311 aa22.83■■□□□ 1.24
COL18A1-207ENST00000473212 GAP43P17677 238 aa22.82■■□□□ 1.24
COL18A1-207ENST00000473212 PODNQ7Z5L7 613 aa22.82■■□□□ 1.24
COL18A1-207ENST00000473212 CDAN1Q8IWY9 1227 aa22.82■■□□□ 1.24
COL18A1-207ENST00000473212 JPH2Q9BR39 696 aaPredicted RBP22.82■■□□□ 1.24
COL18A1-207ENST00000473212 CARD9Q9H257 536 aa22.82■■□□□ 1.24
COL18A1-207ENST00000473212 ZDHHC18Q9NUE0 388 aa22.82■■□□□ 1.24
COL18A1-207ENST00000473212 GAS7O60861 476 aa22.82■■□□□ 1.24
COL18A1-207ENST00000473212 TNFAIP3P21580 790 aa22.82■■□□□ 1.24
COL18A1-207ENST00000473212 EIF3BP55884 814 aaKnown RBP22.82■■□□□ 1.24
COL18A1-207ENST00000473212 ANKRD20A8PQ5CZ79 823 aa22.82■■□□□ 1.24
COL18A1-207ENST00000473212 RBM26Q5T8P6 1007 aaKnown RBP22.82■■□□□ 1.24
COL18A1-207ENST00000473212 DAW1Q8N136 415 aa22.82■■□□□ 1.24
COL18A1-207ENST00000473212 KAT5Q92993 513 aa22.82■■□□□ 1.24
COL18A1-207ENST00000473212 EPB41L4BQ9H329 900 aa22.82■■□□□ 1.24
COL18A1-207ENST00000473212 ACTR5Q9H9F9 607 aaPredicted RBP22.82■■□□□ 1.24
COL18A1-207ENST00000473212 DIS3Q9Y2L1 958 aaKnown RBP22.82■■□□□ 1.24
COL18A1-207ENST00000473212 GOLGA6L10A0A0M3HER8 536 aa22.81■■□□□ 1.24
COL18A1-207ENST00000473212 EIF3DO15371 548 aaKnown RBP eCLIP22.81■■□□□ 1.24
COL18A1-207ENST00000473212 ATP2C2O75185 946 aa22.81■■□□□ 1.24
COL18A1-207ENST00000473212 MMP10P09238 476 aa22.81■■□□□ 1.24
COL18A1-207ENST00000473212 PLTPP55058 493 aa22.81■■□□□ 1.24
COL18A1-207ENST00000473212 MKRN4PQ13434 485 aaPredicted RBP22.81■■□□□ 1.24
COL18A1-207ENST00000473212 FBXO28Q9NVF7 368 aa22.81■■□□□ 1.24
COL18A1-207ENST00000473212 SNX24Q9Y343 169 aa22.81■■□□□ 1.24
COL18A1-207ENST00000473212 MYH11P35749 1972 aa22.81■■□□□ 1.24
COL18A1-207ENST00000473212 TMEM110-MUSTN1A8MSY1 372 aa22.81■■□□□ 1.24
COL18A1-207ENST00000473212 DRD4P21917 467 aa22.81■■□□□ 1.24
COL18A1-207ENST00000473212 GKAP1Q5VSY0 366 aaPredicted RBP22.81■■□□□ 1.24
COL18A1-207ENST00000473212 KRT35Q92764 455 aa22.81■■□□□ 1.24
COL18A1-207ENST00000473212 APEX2Q9UBZ4 518 aa22.81■■□□□ 1.24
COL18A1-207ENST00000473212 SPATA31A6Q5VVP1 1343 aa22.81■■□□□ 1.24
COL18A1-207ENST00000473212 TCP10L2B9ZVM9 353 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 ATMINO43313 823 aaPredicted RBP22.8■■□□□ 1.24
COL18A1-207ENST00000473212 STAT2P52630 851 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 MYL7Q01449 175 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 SF3A3Q12874 501 aaKnown RBP eCLIP22.8■■□□□ 1.246e-7■■■■■ 46
COL18A1-207ENST00000473212 LLGL1Q15334 1064 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 AOC3Q16853 763 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 BTNL9Q6UXG8 535 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 ARHGEF19Q8IW93 802 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 NAP1L3Q99457 506 aaPredicted RBP22.8■■□□□ 1.24
COL18A1-207ENST00000473212 CNOT10Q9H9A5 744 aaKnown RBP22.8■■□□□ 1.24
COL18A1-207ENST00000473212 FRMPD4Q14CM0 1322 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 CLRN2A0PK11 232 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 TMEM150BA6NC51 233 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 EXOC3O60645 756 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 KRT13P13646 458 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 JAMLQ86YT9 394 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 XPO6Q96QU8 1125 aaKnown RBP22.8■■□□□ 1.24
COL18A1-207ENST00000473212 LXNQ9BS40 222 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 DMAC2Q9NW81 257 aa22.8■■□□□ 1.24
COL18A1-207ENST00000473212 HIP1RO75146 1068 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 PRELPP51888 382 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 PMS2P54278 862 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 MAPK7Q13164 816 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 STRIP1Q5VSL9 837 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 HS2ST1Q7LGA3 356 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 HOOK3Q86VS8 718 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 ZDHHC14Q8IZN3 488 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 GPATCH11Q8N954 259 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 LMO3Q8TAP4 145 aa22.79■■□□□ 1.24
COL18A1-207ENST00000473212 SLC5A5Q92911 643 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms