RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 FBXL16Q8N461 479 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 SMYD1Q8NB12 490 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 TBC1D16Q8TBP0 767 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 ATP8B4Q8TF62 1192 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PGM2Q96G03 612 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 ZNF184Q99676 751 aaPredicted RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 SLX1AQ9BQ83 275 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PACSIN1Q9BY11 444 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PUS7LQ9H0K6 701 aaKnown RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 NT5C3AQ9H0P0 336 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 TAOK3Q9H2K8 898 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 SEMA4AQ9H3S1 761 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 GPCPD1Q9NPB8 672 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 SUN2Q9UH99 717 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 RGPD3A6NKT7 1758 aaPredicted RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 RGPD4Q7Z3J3 1758 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 NEXMIFQ5QGS0 1516 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 CACNA1FO60840 1977 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 BICDL2A1A5D9 508 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 DYTNA2CJ06 578 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 TMEM221A6NGB7 291 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 FOXO6A8MYZ6 492 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 CCDC188H7C350 402 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 MAPK13O15264 365 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 NDUFB5O43674 189 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 RAD21O60216 631 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 ADAMTS2O95450 1211 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 GH1P01241 217 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 CYP1A1P04798 512 aaPredicted RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 CCNB1P14635 433 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 VCAM1P19320 739 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 KRT2P35908 639 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 SKIV2L2P42285 1042 aaKnown RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 NEK3P51956 506 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PLOD1Q02809 727 aaPredicted RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 CYLC2Q14093 348 aaPredicted RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 LRRC36Q1X8D7 754 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 VWA3BQ502W6 1294 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 WASHC2DQ5SRD0 308 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 RFWD3Q6PCD5 774 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 LMBR1LQ6UX01 489 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 ISLR2Q6UXK2 745 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 MPRIPQ6WCQ1 1025 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 MARK2Q7KZI7 788 aaKnown RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 TBC1D10CQ8IV04 446 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.54□□□□□ -1.68
VPS50-210ENST00000471188 FBXO25Q8TCJ0 367 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 ANKS1AQ92625 1134 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 GLG1Q92896 1179 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 NAPBQ9H115 298 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 LRMDAQ9H2I8 198 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 COPRSQ9NQ92 184 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 BTBD7Q9P203 1132 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 CTNNAL1Q9UBT7 734 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 MTRF1LQ9UGC7 380 aaKnown RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 PPP1R9AQ9ULJ8 1098 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 FAF1Q9UNN5 650 aaPredicted RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 CPDO75976 1380 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 A0A1W2PRG0 241 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 NKRFO15226 690 aaKnown RBP eCLIP4.53□□□□□ -1.68
VPS50-210ENST00000471188 PJA2O43164 708 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 PDE5AO76074 875 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 GJB6O95452 261 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 ACSL3O95573 720 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 BMP15O95972 392 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 FGGP02679 453 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 TROVE2P10155 538 aaKnown RBP eCLIP4.53□□□□□ -1.68
VPS50-210ENST00000471188 BRAFP15056 766 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 IFNAR1P17181 557 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 HOXD12P35452 270 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 UBA7P41226 1012 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 MTTPP55157 894 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 OXCT1P55809 520 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 ASIC1P78348 528 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 HPCAP84074 193 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 DR1Q01658 176 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 SLC34A1Q06495 639 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 MGAT5Q09328 741 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 KLHL30Q0D2K2 578 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 PDE1CQ14123 709 aaPredicted RBP4.53□□□□□ -1.68
VPS50-210ENST00000471188 NAB2Q15742 525 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 CMPK2Q5EBM0 449 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 EARS2Q5JPH6 523 aaKnown RBP4.53□□□□□ -1.68
VPS50-210ENST00000471188 MORN1Q5T089 497 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 ANKRD40Q6AI12 368 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 DUS1LQ6P1R4 473 aaKnown RBP4.53□□□□□ -1.68
VPS50-210ENST00000471188 LRRC8BQ6P9F7 803 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 IZUMO2Q6UXV1 221 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 DSTYKQ6XUX3 929 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 BARGINQ6ZT62 677 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 CCDC84Q86UT8 332 aaPredicted RBP4.53□□□□□ -1.68
VPS50-210ENST00000471188 COL23A1Q86Y22 540 aaPredicted RBP4.53□□□□□ -1.68
VPS50-210ENST00000471188 METTL13Q8N6R0 699 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 ENDOVQ8N8Q3 282 aaKnown RBP4.53□□□□□ -1.68
VPS50-210ENST00000471188 EIF1ADQ8N9N8 165 aaKnown RBP4.53□□□□□ -1.68
VPS50-210ENST00000471188 TTLL11Q8NHH1 800 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 NAT14Q8WUY8 206 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 GATA6Q92908 595 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 P2RX5Q93086 422 aa4.53□□□□□ -1.68
VPS50-210ENST00000471188 TMEM87BQ96K49 555 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms