RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 HELQQ8TDG4 1101 aa20.33■□□□□ 0.85
PHGDH-204ENST00000469443 PABPC5Q96DU9 382 aaKnown RBP20.33■□□□□ 0.85
PHGDH-204ENST00000469443 UHRF1Q96T88 793 aaPredicted RBP20.33■□□□□ 0.85
PHGDH-204ENST00000469443 DBR1Q9UK59 544 aaKnown RBP20.33■□□□□ 0.85
PHGDH-204ENST00000469443 SMC3Q9UQE7 1217 aa20.33■□□□□ 0.85
PHGDH-204ENST00000469443 PCDHB6Q9Y5E3 794 aa20.33■□□□□ 0.85
PHGDH-204ENST00000469443 TDRD15B5MCY1 1934 aaKnown RBP20.32■□□□□ 0.84
PHGDH-204ENST00000469443 NCK2O43639 380 aa20.32■□□□□ 0.84
PHGDH-204ENST00000469443 USO1O60763 962 aaKnown RBP20.32■□□□□ 0.84
PHGDH-204ENST00000469443 ZNF623O75123 536 aa20.32■□□□□ 0.84
PHGDH-204ENST00000469443 CSPG5O95196 566 aa20.32■□□□□ 0.84
PHGDH-204ENST00000469443 MUTP22033 750 aa20.32■□□□□ 0.84
PHGDH-204ENST00000469443 KCNA5P22460 613 aa20.32■□□□□ 0.84
PHGDH-204ENST00000469443 PTENP60484 403 aa20.32■□□□□ 0.84
PHGDH-204ENST00000469443 POU5F1BQ06416 359 aa20.32■□□□□ 0.84
PHGDH-204ENST00000469443 POTEGQ6S5H5 508 aa20.32■□□□□ 0.84
PHGDH-204ENST00000469443 IFNLR1Q8IU57 520 aaPredicted RBP20.32■□□□□ 0.84
PHGDH-204ENST00000469443 THNSL1Q8IYQ7 743 aa20.32■□□□□ 0.84
PHGDH-204ENST00000469443 ASAP3Q8TDY4 903 aa20.32■□□□□ 0.84
PHGDH-204ENST00000469443 RSPH1Q8WYR4 309 aa20.32■□□□□ 0.84
PHGDH-204ENST00000469443 MRPL9Q9BYD2 267 aaKnown RBP20.32■□□□□ 0.84
PHGDH-204ENST00000469443 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.32■□□□□ 0.84
PHGDH-204ENST00000469443 MUC3AQ02505 3323 aa20.32■□□□□ 0.84
PHGDH-204ENST00000469443 BDP1A6H8Y1 2624 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 H3BQV1 296 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 LAD1O00515 517 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 FGF18O76093 207 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 HYAL1Q12794 435 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 CAPSQ13938 189 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 PDIA5Q14554 519 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 PCBP1Q15365 356 aaKnown RBP eCLIP20.31■□□□□ 0.842e-6■■■□□ 14.6
PHGDH-204ENST00000469443 LEXMQ3ZCV2 418 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 KCNT2Q6UVM3 1135 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 MCPH1Q8NEM0 835 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 PPP2R3CQ969Q6 453 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 ZNF558Q96NG5 402 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 BACH2Q9BYV9 841 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 RAB34Q9BZG1 259 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.31■□□□□ 0.84
PHGDH-204ENST00000469443 LRWD1Q9UFC0 647 aa20.31■□□□□ 0.84
PHGDH-204ENST00000469443 TNFRSF10AO00220 468 aa20.3■□□□□ 0.84
PHGDH-204ENST00000469443 ERLIN2O94905 339 aa20.3■□□□□ 0.84
PHGDH-204ENST00000469443 GLRA2P23416 452 aa20.3■□□□□ 0.84
PHGDH-204ENST00000469443 HOXA11P31270 313 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-204ENST00000469443 IRS1P35568 1242 aa20.3■□□□□ 0.84
PHGDH-204ENST00000469443 RILPL1Q5EBL4 403 aa20.3■□□□□ 0.84
PHGDH-204ENST00000469443 EP400NLQ6ZTU2 488 aa20.3■□□□□ 0.84
PHGDH-204ENST00000469443 LPPQ93052 612 aa20.3■□□□□ 0.84
PHGDH-204ENST00000469443 POLR3FQ9H1D9 316 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-204ENST00000469443 CLDND1Q9NY35 253 aa20.3■□□□□ 0.84
PHGDH-204ENST00000469443 STK24Q9Y6E0 443 aa20.3■□□□□ 0.84
PHGDH-204ENST00000469443 MYH11P35749 1972 aa20.3■□□□□ 0.84
PHGDH-204ENST00000469443 INO80B-WBP1J3KQ70 363 aa20.29■□□□□ 0.84
PHGDH-204ENST00000469443 AXLP30530 894 aa20.29■□□□□ 0.84
PHGDH-204ENST00000469443 PPM1AP35813 382 aa20.29■□□□□ 0.84
PHGDH-204ENST00000469443 CCT6AP40227 531 aaKnown RBP20.29■□□□□ 0.84
PHGDH-204ENST00000469443 PRPHP41219 470 aa20.29■□□□□ 0.84
PHGDH-204ENST00000469443 PLCB3Q01970 1234 aa20.29■□□□□ 0.84
PHGDH-204ENST00000469443 CTC1Q2NKJ3 1217 aa20.29■□□□□ 0.84
PHGDH-204ENST00000469443 LONRF3Q496Y0 759 aa20.29■□□□□ 0.84
PHGDH-204ENST00000469443 GLB1LQ6UWU2 654 aa20.29■□□□□ 0.84
PHGDH-204ENST00000469443 IGSF22Q8N9C0 903 aa20.29■□□□□ 0.84
PHGDH-204ENST00000469443 PGBD4Q96DM1 585 aa20.29■□□□□ 0.84
PHGDH-204ENST00000469443 NECAB3Q96P71 396 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-204ENST00000469443 NFKBIZQ9BYH8 718 aa20.29■□□□□ 0.84
PHGDH-204ENST00000469443 TLR9Q9NR96 1032 aa20.29■□□□□ 0.84
PHGDH-204ENST00000469443 LZTS1Q9Y250 596 aa20.29■□□□□ 0.84
PHGDH-204ENST00000469443 PCDHB2Q9Y5E7 798 aa20.29■□□□□ 0.84
PHGDH-204ENST00000469443 ARHGEF35A5YM69 484 aa20.28■□□□□ 0.84
PHGDH-204ENST00000469443 MEIS3P2A8K0S8 358 aa20.28■□□□□ 0.84
PHGDH-204ENST00000469443 TSPAN1O60635 241 aa20.28■□□□□ 0.84
PHGDH-204ENST00000469443 MBTD1Q05BQ5 628 aa20.28■□□□□ 0.84
PHGDH-204ENST00000469443 ECM1Q16610 540 aa20.28■□□□□ 0.84
PHGDH-204ENST00000469443 UBXN11Q5T124 520 aa20.28■□□□□ 0.84
PHGDH-204ENST00000469443 PADI6Q6TGC4 694 aa20.28■□□□□ 0.84
PHGDH-204ENST00000469443 MAEAQ7L5Y9 396 aa20.28■□□□□ 0.84
PHGDH-204ENST00000469443 MRPL10Q7Z7H8 261 aaKnown RBP20.28■□□□□ 0.84
PHGDH-204ENST00000469443 ADGRD2Q7Z7M1 963 aa20.28■□□□□ 0.84
PHGDH-204ENST00000469443 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.28■□□□□ 0.84
PHGDH-204ENST00000469443 MRPS27Q92552 414 aaKnown RBP20.28■□□□□ 0.84
PHGDH-204ENST00000469443 IGFLR1Q9H665 355 aa20.28■□□□□ 0.84
PHGDH-204ENST00000469443 GPRC5CQ9NQ84 441 aa20.28■□□□□ 0.84
PHGDH-204ENST00000469443 H3BQ06 376 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-204ENST00000469443 OFD1O75665 1012 aa20.27■□□□□ 0.84
PHGDH-204ENST00000469443 GTF2F1P35269 517 aaKnown RBP eCLIP20.27■□□□□ 0.84
PHGDH-204ENST00000469443 LTBRP36941 435 aa20.27■□□□□ 0.84
PHGDH-204ENST00000469443 PBX3P40426 434 aa20.27■□□□□ 0.84
PHGDH-204ENST00000469443 NCBP1Q09161 790 aaKnown RBP20.27■□□□□ 0.84
PHGDH-204ENST00000469443 CUL4AQ13619 759 aa20.27■□□□□ 0.84
PHGDH-204ENST00000469443 AMHR2Q16671 573 aa20.27■□□□□ 0.84
PHGDH-204ENST00000469443 PUS10Q3MIT2 529 aaKnown RBP20.27■□□□□ 0.84
PHGDH-204ENST00000469443 NOMO2Q5JPE7 1267 aa20.27■□□□□ 0.84
PHGDH-204ENST00000469443 LARP1BQ659C4 914 aaKnown RBP20.27■□□□□ 0.84
PHGDH-204ENST00000469443 PDE12Q6L8Q7 609 aaKnown RBP20.27■□□□□ 0.84
PHGDH-204ENST00000469443 NOTUMQ6P988 496 aa20.27■□□□□ 0.84
PHGDH-204ENST00000469443 DTHD1Q6ZMT9 781 aa20.27■□□□□ 0.84
PHGDH-204ENST00000469443 SNX29Q8TEQ0 813 aa20.27■□□□□ 0.84
PHGDH-204ENST00000469443 CCDC51Q96ER9 411 aa20.27■□□□□ 0.84
PHGDH-204ENST00000469443 SPG21Q9NZD8 308 aa20.27■□□□□ 0.84
PHGDH-204ENST00000469443 PUF60Q9UHX1 559 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms