RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 QPCTLQ9NXS2 382 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 GALNT8Q9NY28 637 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 DDX56Q9NY93 547 aaKnown RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 UGGT1Q9NYU2 1555 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 PARP2Q9UGN5 583 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 LEMD3Q9Y2U8 911 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 TMEM98Q9Y2Y6 226 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 NFE2L3Q9Y4A8 694 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 HYOU1Q9Y4L1 999 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 EPN1Q9Y6I3 576 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 PREX1Q8TCU6 1659 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 DLC1Q96QB1 1528 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 CAMSAP1Q5T5Y3 1602 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 PTPRMP28827 1452 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 AFF2P51816 1311 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 MROH7Q68CQ1 1323 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 WDR19Q8NEZ3 1342 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 SMIM31A0A1B0GVY4 71 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 DPPA5A6NC42 116 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 M0R2C6 588 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 LSM1O15116 133 aaKnown RBP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 SART1O43290 800 aaKnown RBP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 KDM1AO60341 852 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 SORBS3O60504 671 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 ATP6V1G1O75348 118 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 SKAP2O75563 359 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 KRT38O76015 456 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 SUN1O94901 812 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 NDUFA10O95299 355 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 ECEL1O95672 775 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 BMP15O95972 392 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 ZFYP08048 801 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 UBTFL1P0CB47 393 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 XRCC5P13010 732 aaKnown RBP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 PFKFB1P16118 471 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 EPHA1P21709 976 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 S100A1P23297 94 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 CDC27P30260 824 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 PPP1R2P41236 205 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 TNNC1P63316 161 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 ZBED6P86452 979 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 FKBP4Q02790 459 aaKnown RBP eCLIP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 MPP3Q13368 585 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 TOB2Q14106 344 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 NONOQ15233 471 aaKnown RBP eCLIP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 CCDC153Q494R4 210 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 ACCSLQ4AC99 568 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 ODF2Q5BJF6 829 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 ERMARDQ5T6L9 678 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 ANO1Q5XXA6 986 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 RAD9BQ6WBX8 426 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 TMC4Q7Z404 712 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 PIGWQ7Z7B1 504 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 ZNF554Q86TJ5 538 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 PNMA8AQ86V59 439 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 ERICH1Q86X53 443 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 MCF2L2Q86YR7 1114 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 LRRC49Q8IUZ0 686 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 IQCF2Q8IXL9 164 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 TSPYL6Q8N831 410 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 NECAB1Q8N987 351 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 C8orf58Q8NAV2 365 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 PPFIBP2Q8ND30 876 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 AGAP11Q8TF27 550 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 UBASH3BQ8TF42 649 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 RIN2Q8WYP3 895 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 HIC2Q96JB3 615 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 NEUROD6Q96NK8 337 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 UBL7Q96S82 380 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 MMS19Q96T76 1030 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 AGXT2Q9BYV1 514 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 FAM129AQ9BZQ8 928 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 EPB41L1Q9H4G0 881 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 RNPEPL1Q9HAU8 725 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 ABHD10Q9NUJ1 306 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 RNF19AQ9NV58 838 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 CCDC87Q9NVE4 849 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 AATFQ9NY61 560 aaKnown RBP eCLIP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 ABI2Q9NYB9 513 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 THEGQ9P2T0 379 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 HDAC6Q9UBN7 1215 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 VTI1BQ9UEU0 232 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 LIMA1Q9UHB6 759 aaKnown RBP5.26□□□□□ -1.57
SF3B1-207ENST00000468925 SLC12A6Q9UHW9 1150 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 SNX12Q9UMY4 172 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 FRMD4BQ9Y2L6 1034 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 MLH3Q9UHC1 1453 aa5.26□□□□□ -1.57
SF3B1-207ENST00000468925 SALL1Q9NSC2 1324 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 A0A1B0GVL5 298 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 PTPDC1A2A3K4 754 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 CETN3O15182 167 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 TREHO43280 583 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 DNAJC6O75061 913 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 PTCD1O75127 700 aaKnown RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 STK10O94804 968 aaKnown RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 SSBP05455 408 aaKnown RBP eCLIP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 LDHBP07195 334 aaKnown RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 FGRP09769 529 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 IFIT2P09913 472 aaKnown RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 ATP1A3P13637 1013 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms