RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 AMHP03971 560 aa20.43■□□□□ 0.86
SCAMP3-204ENST00000465312 PLS3P13797 630 aa20.43■□□□□ 0.86
SCAMP3-204ENST00000465312 WDR5P61964 334 aaKnown RBP20.43■□□□□ 0.86
SCAMP3-204ENST00000465312 ASIC1P78348 528 aa20.43■□□□□ 0.86
SCAMP3-204ENST00000465312 GIT2Q14161 759 aa20.43■□□□□ 0.86
SCAMP3-204ENST00000465312 DAW1Q8N136 415 aa20.43■□□□□ 0.86
SCAMP3-204ENST00000465312 CNNM3Q8NE01 707 aa20.43■□□□□ 0.86
SCAMP3-204ENST00000465312 VWCEQ96DN2 955 aa20.43■□□□□ 0.86
SCAMP3-204ENST00000465312 CCDC34Q96HJ3 373 aa20.43■□□□□ 0.86
SCAMP3-204ENST00000465312 MINDY3Q9H8M7 445 aa20.43■□□□□ 0.86
SCAMP3-204ENST00000465312 PARVGQ9HBI0 331 aa20.43■□□□□ 0.86
SCAMP3-204ENST00000465312 CXXC1Q9P0U4 656 aaPredicted RBP20.43■□□□□ 0.86
SCAMP3-204ENST00000465312 K7ENM7 598 aa20.42■□□□□ 0.86
SCAMP3-204ENST00000465312 SLC16A4O15374 487 aa20.42■□□□□ 0.86
SCAMP3-204ENST00000465312 UPP2O95045 317 aa20.42■□□□□ 0.86
SCAMP3-204ENST00000465312 NPTX2P47972 431 aa20.42■□□□□ 0.86
SCAMP3-204ENST00000465312 MAPK7Q13164 816 aa20.42■□□□□ 0.86
SCAMP3-204ENST00000465312 MAPK6Q16659 721 aa20.42■□□□□ 0.86
SCAMP3-204ENST00000465312 TWF2Q6IBS0 349 aaKnown RBP20.42■□□□□ 0.86
SCAMP3-204ENST00000465312 FAM117BQ6P1L5 589 aa20.42■□□□□ 0.86
SCAMP3-204ENST00000465312 ADAM2Q99965 735 aa20.42■□□□□ 0.86
SCAMP3-204ENST00000465312 ZBED2Q9BTP6 218 aa20.42■□□□□ 0.86
SCAMP3-204ENST00000465312 C17orf75Q9HAS0 396 aa20.42■□□□□ 0.86
SCAMP3-204ENST00000465312 USP25Q9UHP3 1055 aa20.42■□□□□ 0.86
SCAMP3-204ENST00000465312 KCNG1Q9UIX4 513 aa20.42■□□□□ 0.86
SCAMP3-204ENST00000465312 MICAL3Q7RTP6 2002 aa20.41■□□□□ 0.86
SCAMP3-204ENST00000465312 PRPF40AO75400 957 aaKnown RBP20.41■□□□□ 0.86
SCAMP3-204ENST00000465312 PRKCBP05771 671 aa20.41■□□□□ 0.86
SCAMP3-204ENST00000465312 SLFN14P0C7P3 912 aa20.41■□□□□ 0.86
SCAMP3-204ENST00000465312 ATP2A2P16615 1042 aaKnown RBP20.41■□□□□ 0.86
SCAMP3-204ENST00000465312 EFNA5P52803 228 aa20.41■□□□□ 0.86
SCAMP3-204ENST00000465312 MBTD1Q05BQ5 628 aa20.41■□□□□ 0.86
SCAMP3-204ENST00000465312 POU5F1BQ06416 359 aa20.41■□□□□ 0.86
SCAMP3-204ENST00000465312 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.41■□□□□ 0.864e-6■■■■□ 20
SCAMP3-204ENST00000465312 CCDC65Q8IXS2 484 aa20.41■□□□□ 0.86
SCAMP3-204ENST00000465312 GRAMD1CQ8IYS0 662 aa20.41■□□□□ 0.86
SCAMP3-204ENST00000465312 BLZF1Q9H2G9 400 aa20.41■□□□□ 0.86
SCAMP3-204ENST00000465312 LRFN2Q9ULH4 789 aa20.41■□□□□ 0.86
SCAMP3-204ENST00000465312 HPSEQ9Y251 543 aa20.41■□□□□ 0.86
SCAMP3-204ENST00000465312 GOLGA6L22H0YM25 854 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 K7ERI5 159 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 ZNF202O95125 648 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 DEFB103AP81534 67 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 STRN3Q13033 797 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 LONRF3Q496Y0 759 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 CDCA2Q69YH5 1023 aaPredicted RBP20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 SFR1Q86XK3 245 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 FAM178BQ8IXR5 827 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 RNF169Q8NCN4 708 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 CPB2Q96IY4 423 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 SLC9A7Q96T83 725 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 NFKBIZQ9BYH8 718 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 TMX1Q9H3N1 280 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 PANK4Q9NVE7 773 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 PRMT7Q9NVM4 692 aaPredicted RBP20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 KBTBD4Q9NVX7 518 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 DACT1Q9NYF0 836 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 TBC1D7Q9P0N9 293 aa20.4■□□□□ 0.86
SCAMP3-204ENST00000465312 PHLPP2Q6ZVD8 1323 aa20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 ADGRA3Q8IWK6 1321 aa20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 A0A1W2PPC1 479 aa20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 H0YCG3 227 aa20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 ACTN4O43707 911 aaKnown RBP20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 TRAK2O60296 914 aa20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 MGEA5O60502 916 aa20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 GADD45BO75293 160 aaPredicted RBP20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 GAP43P17677 238 aa20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 PRPF4BQ13523 1007 aaKnown RBP20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 HERC4Q5GLZ8 1057 aaPredicted RBP20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 TMCO2Q7Z6W1 182 aaPredicted RBP20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 BICD1Q96G01 975 aa20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 PRO3102Q9H379 93 aa20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 AGPAT5Q9NUQ2 364 aa20.39■□□□□ 0.85
SCAMP3-204ENST00000465312 ENPP3O14638 875 aa20.38■□□□□ 0.85
SCAMP3-204ENST00000465312 B4GALT5O43286 388 aa20.38■□□□□ 0.85
SCAMP3-204ENST00000465312 TSPAN1O60635 241 aa20.38■□□□□ 0.85
SCAMP3-204ENST00000465312 CASP1P29466 404 aa20.38■□□□□ 0.85
SCAMP3-204ENST00000465312 FAM160A1Q05DH4 1040 aa20.38■□□□□ 0.85
SCAMP3-204ENST00000465312 KRBA2Q6ZNG9 492 aa20.38■□□□□ 0.85
SCAMP3-204ENST00000465312 IFNLR1Q8IU57 520 aaPredicted RBP20.38■□□□□ 0.85
SCAMP3-204ENST00000465312 TMEM87AQ8NBN3 555 aa20.38■□□□□ 0.85
SCAMP3-204ENST00000465312 SPIRE2Q8WWL2 714 aa20.38■□□□□ 0.85
SCAMP3-204ENST00000465312 PAGE5Q96GU1 130 aa20.38■□□□□ 0.85
SCAMP3-204ENST00000465312 TRIM9Q9C026 710 aa20.38■□□□□ 0.85
SCAMP3-204ENST00000465312 TRIM6Q9C030 488 aaPredicted RBP20.38■□□□□ 0.85
SCAMP3-204ENST00000465312 MRPL44Q9H9J2 332 aaKnown RBP20.38■□□□□ 0.85
SCAMP3-204ENST00000465312 C1orf112Q9NSG2 853 aa20.38■□□□□ 0.85
SCAMP3-204ENST00000465312 FAM237AA0A1B0GTK4 181 aa20.37■□□□□ 0.85
SCAMP3-204ENST00000465312 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.37■□□□□ 0.85
SCAMP3-204ENST00000465312 KINO60870 393 aaKnown RBP20.37■□□□□ 0.85
SCAMP3-204ENST00000465312 MATR3P43243 847 aaKnown RBP eCLIP20.37■□□□□ 0.85
SCAMP3-204ENST00000465312 UBE2HP62256 183 aa20.37■□□□□ 0.85
SCAMP3-204ENST00000465312 PCBP1Q15365 356 aaKnown RBP eCLIP20.37■□□□□ 0.85
SCAMP3-204ENST00000465312 NOTUMQ6P988 496 aa20.37■□□□□ 0.85
SCAMP3-204ENST00000465312 LINC01599Q8WXQ3 324 aa20.37■□□□□ 0.85
SCAMP3-204ENST00000465312 CCDC47Q96A33 483 aaKnown RBP20.37■□□□□ 0.85
SCAMP3-204ENST00000465312 DNAJC19Q96DA6 116 aa20.37■□□□□ 0.85
SCAMP3-204ENST00000465312 PRIMPOLQ96LW4 560 aa20.37■□□□□ 0.85
SCAMP3-204ENST00000465312 TSPYL2Q9H2G4 693 aaPredicted RBP20.37■□□□□ 0.85
SCAMP3-204ENST00000465312 CHST12Q9NRB3 414 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms