RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 KCNK18Q7Z418 384 aa24.09■■□□□ 1.45
SSNA1-202ENST00000459860 RTN4RL1Q86UN2 441 aaPredicted RBP24.09■■□□□ 1.45
SSNA1-202ENST00000459860 ZBTB8OSQ8IWT0 167 aa24.09■■□□□ 1.45
SSNA1-202ENST00000459860 IFT74Q96LB3 600 aa24.09■■□□□ 1.45
SSNA1-202ENST00000459860 CCSER1Q9C0I3 900 aa24.09■■□□□ 1.45
SSNA1-202ENST00000459860 CHST12Q9NRB3 414 aa24.09■■□□□ 1.45
SSNA1-202ENST00000459860 PIN4Q9Y237 131 aaKnown RBP24.09■■□□□ 1.45
SSNA1-202ENST00000459860 PPP6R2O75170 966 aa24.08■■□□□ 1.45
SSNA1-202ENST00000459860 PLA2G4BP0C869 781 aa24.08■■□□□ 1.45
SSNA1-202ENST00000459860 PTENP60484 403 aa24.08■■□□□ 1.45
SSNA1-202ENST00000459860 HTRA4P83105 476 aaPredicted RBP24.08■■□□□ 1.45
SSNA1-202ENST00000459860 NCBP1Q09161 790 aaKnown RBP24.08■■□□□ 1.45
SSNA1-202ENST00000459860 DSC3Q14574 896 aa24.08■■□□□ 1.45
SSNA1-202ENST00000459860 KARSQ15046 597 aaKnown RBP24.08■■□□□ 1.45
SSNA1-202ENST00000459860 KCNG4Q8TDN1 519 aa24.08■■□□□ 1.45
SSNA1-202ENST00000459860 CLIC6Q96NY7 704 aa24.08■■□□□ 1.45
SSNA1-202ENST00000459860 TIPINQ9BVW5 301 aa24.08■■□□□ 1.45
SSNA1-202ENST00000459860 NFKBIZQ9BYH8 718 aa24.08■■□□□ 1.45
SSNA1-202ENST00000459860 CERS4Q9HA82 394 aa24.08■■□□□ 1.45
SSNA1-202ENST00000459860 PCDHB7Q9Y5E2 793 aa24.08■■□□□ 1.45
SSNA1-202ENST00000459860 MYH11P35749 1972 aa24.08■■□□□ 1.45
SSNA1-202ENST00000459860 COL4A6Q14031 1691 aa24.08■■□□□ 1.44
SSNA1-202ENST00000459860 INO80B-WBP1J3KQ70 363 aa24.07■■□□□ 1.44
SSNA1-202ENST00000459860 BMP1P13497 986 aa24.07■■□□□ 1.44
SSNA1-202ENST00000459860 PLCG1P19174 1290 aa24.07■■□□□ 1.44
SSNA1-202ENST00000459860 SPECC1Q5M775 1068 aa24.07■■□□□ 1.44
SSNA1-202ENST00000459860 IFNLR1Q8IU57 520 aaPredicted RBP24.07■■□□□ 1.44
SSNA1-202ENST00000459860 MICALL1Q8N3F8 863 aa24.07■■□□□ 1.44
SSNA1-202ENST00000459860 SYT2Q8N9I0 419 aaPredicted RBP24.07■■□□□ 1.44
SSNA1-202ENST00000459860 DRC1Q96MC2 740 aa24.07■■□□□ 1.44
SSNA1-202ENST00000459860 C2orf40Q9H1Z8 148 aa24.07■■□□□ 1.44
SSNA1-202ENST00000459860 KCND2Q9NZV8 630 aa24.07■■□□□ 1.44
SSNA1-202ENST00000459860 C9IYK1 514 aa24.06■■□□□ 1.44
SSNA1-202ENST00000459860 NAMPTP43490 491 aa24.06■■□□□ 1.44
SSNA1-202ENST00000459860 TFF2Q03403 129 aa24.06■■□□□ 1.44
SSNA1-202ENST00000459860 TWF2Q6IBS0 349 aaKnown RBP24.06■■□□□ 1.44
SSNA1-202ENST00000459860 RINT1Q6NUQ1 792 aa24.06■■□□□ 1.44
SSNA1-202ENST00000459860 SPRED2Q7Z698 418 aa24.06■■□□□ 1.44
SSNA1-202ENST00000459860 DEPTORQ8TB45 409 aa24.06■■□□□ 1.44
SSNA1-202ENST00000459860 EPSTI1Q96J88 318 aa24.06■■□□□ 1.44
SSNA1-202ENST00000459860 UHRF1Q96T88 793 aaPredicted RBP24.06■■□□□ 1.44
SSNA1-202ENST00000459860 AGPAT5Q9NUQ2 364 aa24.06■■□□□ 1.44
SSNA1-202ENST00000459860 NLRC5Q86WI3 1866 aa24.06■■□□□ 1.44
SSNA1-202ENST00000459860 ADGRA3Q8IWK6 1321 aa24.06■■□□□ 1.44
SSNA1-202ENST00000459860 TRANK1O15050 2925 aa24.05■■□□□ 1.44
SSNA1-202ENST00000459860 RALGAPA2Q2PPJ7 1873 aa24.05■■□□□ 1.44
SSNA1-202ENST00000459860 LCHNA4D1U4 455 aa24.05■■□□□ 1.44
SSNA1-202ENST00000459860 SKIP12755 728 aa24.05■■□□□ 1.44
SSNA1-202ENST00000459860 NCLP19338 710 aaKnown RBP24.05■■□□□ 1.44
SSNA1-202ENST00000459860 DNM1Q05193 864 aaKnown RBP24.05■■□□□ 1.44
SSNA1-202ENST00000459860 RUSC1Q9BVN2 902 aa24.05■■□□□ 1.44
SSNA1-202ENST00000459860 ELAC1Q9H777 363 aaKnown RBP24.05■■□□□ 1.44
SSNA1-202ENST00000459860 MINDY3Q9H8M7 445 aa24.05■■□□□ 1.44
SSNA1-202ENST00000459860 TMEM161AQ9NX61 479 aa24.05■■□□□ 1.44
SSNA1-202ENST00000459860 CUTAO60888 179 aa24.04■■□□□ 1.44
SSNA1-202ENST00000459860 HIP1RO75146 1068 aa24.04■■□□□ 1.44
SSNA1-202ENST00000459860 GUCY2CP25092 1073 aa24.04■■□□□ 1.44
SSNA1-202ENST00000459860 AXLP30530 894 aa24.04■■□□□ 1.44
SSNA1-202ENST00000459860 ANP32AP39687 249 aaKnown RBP24.04■■□□□ 1.44
SSNA1-202ENST00000459860 SLC12A3P55017 1021 aa24.04■■□□□ 1.44
SSNA1-202ENST00000459860 KRT85P78386 507 aa24.04■■□□□ 1.44
SSNA1-202ENST00000459860 MBTD1Q05BQ5 628 aa24.04■■□□□ 1.44
SSNA1-202ENST00000459860 RRAGBQ5VZM2 374 aa24.04■■□□□ 1.44
SSNA1-202ENST00000459860 C1orf186Q6ZWK4 172 aa24.04■■□□□ 1.44
SSNA1-202ENST00000459860 SP7Q8TDD2 431 aaPredicted RBP24.04■■□□□ 1.44
SSNA1-202ENST00000459860 ARNTL2Q8WYA1 636 aa24.04■■□□□ 1.44
SSNA1-202ENST00000459860 LARP4BQ92615 738 aaKnown RBP24.04■■□□□ 1.44
SSNA1-202ENST00000459860 RAD54LQ92698 747 aa24.04■■□□□ 1.44
SSNA1-202ENST00000459860 STK17AQ9UEE5 414 aa24.04■■□□□ 1.44
SSNA1-202ENST00000459860 LINC01553A4QN01 128 aa24.03■■□□□ 1.44
SSNA1-202ENST00000459860 HOXA2O43364 376 aa24.03■■□□□ 1.44
SSNA1-202ENST00000459860 LPXNO60711 386 aa24.03■■□□□ 1.44
SSNA1-202ENST00000459860 DGKIO75912 1065 aa24.03■■□□□ 1.44
SSNA1-202ENST00000459860 KRT18P05783 430 aaKnown RBP24.03■■□□□ 1.44
SSNA1-202ENST00000459860 ME1P48163 572 aa24.03■■□□□ 1.44
SSNA1-202ENST00000459860 RAB27AP51159 221 aa24.03■■□□□ 1.44
SSNA1-202ENST00000459860 NUCB2P80303 420 aa24.03■■□□□ 1.44
SSNA1-202ENST00000459860 DMP1Q13316 513 aaPredicted RBP24.03■■□□□ 1.44
SSNA1-202ENST00000459860 BTG3Q14201 252 aaPredicted RBP24.03■■□□□ 1.44
SSNA1-202ENST00000459860 DHX8Q14562 1220 aaKnown RBP24.03■■□□□ 1.44
SSNA1-202ENST00000459860 CDCA2Q69YH5 1023 aaPredicted RBP24.03■■□□□ 1.44
SSNA1-202ENST00000459860 CCDC73Q6ZRK6 1079 aa24.03■■□□□ 1.44
SSNA1-202ENST00000459860 USP49Q70CQ1 688 aa24.03■■□□□ 1.44
SSNA1-202ENST00000459860 GPBP1Q86WP2 473 aa24.03■■□□□ 1.44
SSNA1-202ENST00000459860 FIBCD1Q8N539 461 aa24.03■■□□□ 1.44
SSNA1-202ENST00000459860 TGS1Q96RS0 853 aaKnown RBP24.03■■□□□ 1.44
SSNA1-202ENST00000459860 C17orf75Q9HAS0 396 aa24.03■■□□□ 1.44
SSNA1-202ENST00000459860 PRMT7Q9NVM4 692 aaPredicted RBP24.03■■□□□ 1.44
SSNA1-202ENST00000459860 ZDHHC9Q9Y397 364 aa24.03■■□□□ 1.44
SSNA1-202ENST00000459860 FNDC1Q4ZHG4 1894 aaPredicted RBP24.02■■□□□ 1.44
SSNA1-202ENST00000459860 FAM189BP81408 668 aa24.02■■□□□ 1.44
SSNA1-202ENST00000459860 NOTUMQ6P988 496 aa24.02■■□□□ 1.44
SSNA1-202ENST00000459860 ECHDC2Q86YB7 292 aa24.02■■□□□ 1.44
SSNA1-202ENST00000459860 CMTR2Q8IYT2 770 aaKnown RBP24.02■■□□□ 1.44
SSNA1-202ENST00000459860 RNF169Q8NCN4 708 aa24.02■■□□□ 1.44
SSNA1-202ENST00000459860 BSNDQ8WZ55 320 aa24.02■■□□□ 1.44
SSNA1-202ENST00000459860 CCDC51Q96ER9 411 aa24.02■■□□□ 1.44
SSNA1-202ENST00000459860 PRIMPOLQ96LW4 560 aa24.02■■□□□ 1.44
SSNA1-202ENST00000459860 NECAB3Q96P71 396 aaPredicted RBP24.02■■□□□ 1.44
SSNA1-202ENST00000459860 BLOC1S4Q9NUP1 217 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms