RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 XPO4Q9C0E2 1151 aaKnown RBP6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 NUCKS1Q9H1E3 243 aaKnown RBP6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 VPS16Q9H269 839 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 ST6GALNAC4Q9H4F1 302 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 DHX33Q9H6R0 707 aaKnown RBP6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 TMEM134Q9H6X4 195 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 LUC7LQ9NQ29 371 aaKnown RBP6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 SAMSN1Q9NSI8 373 aaKnown RBP6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 TBX20Q9UMR3 447 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 TRAF3IP3Q9Y228 551 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 TRIM49BA6NDI0 452 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZNF233A6NK53 670 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 RSPH10B2B2RC85 870 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZNF862O60290 1169 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 PHACTR2O75167 634 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 ARIH2O95376 493 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 RSPH10BP0C881 870 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZNF286BP0CG31 522 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZNF865P0CJ78 1059 aaPredicted RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 MYBP10242 640 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 CYP2C9P11712 490 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 CD44P16070 742 aaKnown RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 CAPN2P17655 700 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 BMP6P22004 513 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 GARTP22102 1010 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 PSEN2P49810 448 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 CYP2J2P51589 502 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 COPB1P53618 953 aaKnown RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 NCKAP1LP55160 1127 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 GTF2BQ00403 316 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 POU5F1BQ06416 359 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 LAMTOR4Q0VGL1 99 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 PRPF4BQ13523 1007 aaKnown RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 GRIK4Q16099 956 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 PKN2Q16513 984 aaKnown RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 BMT2Q1RMZ1 405 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZC2HC1CQ53FD0 456 aaPredicted RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 DCAF17Q5H9S7 520 aaPredicted RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 TTI2Q6NXR4 508 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 TAF2Q6P1X5 1199 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 NFRKBQ6P4R8 1299 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 MTHFD1LQ6UB35 978 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 SRGAP1Q7Z6B7 1085 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZNF410Q86VK4 478 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 FAM186BQ8IYM0 893 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 KIAA0895Q8NCT3 520 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 NEK11Q8NG66 645 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZNF296Q8WUU4 475 aaPredicted RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 SCFD1Q8WVM8 642 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 PRPF31Q8WWY3 499 aaKnown RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 HPS3Q969F9 1004 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 FAM81BQ96LP2 452 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 FGD4Q96M96 766 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 PPP1R9BQ96SB3 815 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 TRIM6Q9C030 488 aaPredicted RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 NDST4Q9H3R1 872 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 RNPEPQ9H4A4 650 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 MMRN2Q9H8L6 949 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 PRMT7Q9NVM4 692 aaPredicted RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 WRAP73Q9P2S5 460 aaPredicted RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 LIMA1Q9UHB6 759 aaKnown RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 DDX20Q9UHI6 824 aaKnown RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 GABRQQ9UN88 632 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 GINS2Q9Y248 185 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 LUC7L2Q9Y383 392 aaKnown RBP6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 ASTN1O14525 1302 aa6.38□□□□□ -1.39
RNU1-88P-201ENST00000459274 SMIM35A0A1B0GVV1 85 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 MOXD2PA6NHM9 499 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 LRRC10BA6NIK2 292 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 CLIC2O15247 247 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 MAPK13O15264 365 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 TLR3O15455 904 aaKnown RBP6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 AFPP02771 609 aaKnown RBP6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 SMIM10L2AP0DMW4 78 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 SMIM10L2BP0DMW5 78 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 CYBAP13498 195 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 ELNP15502 786 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZSCAN20P17040 1043 aaPredicted RBP6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 TNNI1P19237 187 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 AXLP30530 894 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 AP3M2P53677 418 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 YARSP54577 528 aaKnown RBP6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 GJA9P57773 515 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 C1QTNF8P60827 252 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 PTPN11Q06124 597 aaPredicted RBP6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 CACNB2Q08289 660 aaPredicted RBP6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 EHHADHQ08426 723 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 KRT31Q15323 416 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 SYCP1Q15431 976 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 NFIL3Q16649 462 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 VWA3BQ502W6 1294 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 WDR44Q5JSH3 913 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 DNTTIP2Q5QJE6 756 aaKnown RBP6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 GJC2Q5T442 439 aaPredicted RBP6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 CDKAL1Q5VV42 579 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZPBP2Q6X784 338 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 GBP6Q6ZN66 633 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 VPS36Q86VN1 386 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 TRIM50Q86XT4 487 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms