RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 HSPA6P17066 643 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 GNA15P30679 374 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 GPC5P78333 572 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 LRRC63Q05C16 580 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 FAM118BQ9BPY3 351 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 DCTN3O75935 186 aa20.93■□□□□ 0.94
SNX27-204ENST00000458013 SNRNP48Q6IEG0 339 aaKnown RBP20.93■□□□□ 0.94
SNX27-204ENST00000458013 LRRC8EQ6NSJ5 796 aa20.93■□□□□ 0.94
SNX27-204ENST00000458013 DACH2Q96NX9 599 aa20.93■□□□□ 0.94
SNX27-204ENST00000458013 KIAA1755Q5JYT7 1200 aa20.93■□□□□ 0.94
SNX27-204ENST00000458013 ANKRD40Q6AI12 368 aa20.93■□□□□ 0.94
SNX27-204ENST00000458013 POLR3FQ9H1D9 316 aaPredicted RBP20.93■□□□□ 0.94
SNX27-204ENST00000458013 ATP1A1P05023 1023 aaKnown RBP20.93■□□□□ 0.94
SNX27-204ENST00000458013 EXOC8Q8IYI6 725 aa20.93■□□□□ 0.94
SNX27-204ENST00000458013 ZHX2Q9Y6X8 837 aa20.93■□□□□ 0.94
SNX27-204ENST00000458013 TRIM49P0CI25 452 aa20.93■□□□□ 0.94
SNX27-204ENST00000458013 TRIM49CP0CI26 452 aa20.93■□□□□ 0.94
SNX27-204ENST00000458013 FLAD1Q8NFF5 587 aa20.93■□□□□ 0.94
SNX27-204ENST00000458013 TUBB6Q9BUF5 446 aa20.93■□□□□ 0.94
SNX27-204ENST00000458013 KCNA4P22459 653 aa20.93■□□□□ 0.94
SNX27-204ENST00000458013 SEPT2Q15019 361 aa20.93■□□□□ 0.94
SNX27-204ENST00000458013 TMEM60Q9H2L4 133 aa20.93■□□□□ 0.94
SNX27-204ENST00000458013 SHANK2Q9UPX8 1470 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 EPHA10Q5JZY3 1008 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 OSBPL9Q96SU4 736 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 KRT14P02533 472 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 ARAP3Q8WWN8 1544 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 ATP8B1O43520 1251 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 FTLP02792 175 aaPredicted RBP20.92■□□□□ 0.94
SNX27-204ENST00000458013 PSMC1P62191 440 aaKnown RBP20.92■□□□□ 0.94
SNX27-204ENST00000458013 ZBTB17Q13105 803 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 UNC13DQ70J99 1090 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 C11orf74Q86VG3 221 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 GPR108Q9NPR9 543 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 ASNSD1Q9NWL6 643 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 IREB2P48200 963 aaKnown RBP20.92■□□□□ 0.94
SNX27-204ENST00000458013 NECTIN1Q15223 517 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 ZNF302Q9NR11 478 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 GABBR1Q9UBS5 961 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 NPC1L1Q9UHC9 1359 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 CYP2E1P05181 493 aaPredicted RBP20.92■□□□□ 0.94
SNX27-204ENST00000458013 NUMBP49757 651 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 PMS1P54277 932 aaKnown RBP20.92■□□□□ 0.94
SNX27-204ENST00000458013 DRAP1Q14919 205 aaPredicted RBP20.92■□□□□ 0.94
SNX27-204ENST00000458013 TXNRD1Q16881 649 aa20.92■□□□□ 0.94
SNX27-204ENST00000458013 VAMP7P51809 220 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 EFTUD2Q15029 972 aaKnown RBP eCLIP20.91■□□□□ 0.94
SNX27-204ENST00000458013 GRAPQ13588 217 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 CUL3Q13618 768 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 LRRC36Q1X8D7 754 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 DALRD3Q5D0E6 543 aaKnown RBP20.91■□□□□ 0.94
SNX27-204ENST00000458013 GRAPLQ8TC17 118 aaPredicted RBP20.91■□□□□ 0.94
SNX27-204ENST00000458013 SLC26A7Q8TE54 656 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 TMEM47Q9BQJ4 181 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 YY1AP1Q9H869 796 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 KIF28PB7ZC32 967 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 DHX35Q9H5Z1 703 aaKnown RBP20.91■□□□□ 0.94
SNX27-204ENST00000458013 PAPOLAP51003 745 aaKnown RBP20.91■□□□□ 0.94
SNX27-204ENST00000458013 EIF3BP55884 814 aaKnown RBP20.91■□□□□ 0.94
SNX27-204ENST00000458013 MTF1Q14872 753 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 EXOC4Q96A65 974 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 NEUROG2Q9H2A3 272 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 SP110Q9HB58 689 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 METP08581 1390 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 CIITAP33076 1130 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 ROR1Q01973 937 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 CUL4AQ13619 759 aa20.91■□□□□ 0.94
SNX27-204ENST00000458013 CCDC151A5D8V7 595 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 MTM1Q13496 603 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 COBLL1Q53SF7 1204 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 KRT37O76014 449 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 FASTKD1Q53R41 847 aaKnown RBP20.9■□□□□ 0.94
SNX27-204ENST00000458013 CIAPIN1Q6FI81 312 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 RHOT2Q8IXI1 618 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 ADGRF4Q8IZF3 695 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 B4GALNT2Q8NHY0 566 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 USP33Q8TEY7 942 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 ULK4Q96C45 1275 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 CEP95Q96GE4 821 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 HPCAL4Q9UM19 191 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 SUPT3HO75486 399 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 WDR75Q8IWA0 830 aaKnown RBP20.9■□□□□ 0.94
SNX27-204ENST00000458013 UGGT1Q9NYU2 1555 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 WDR48Q8TAF3 677 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 OSBPL1AQ9BXW6 950 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 NOP53Q9NZM5 478 aaKnown RBP20.9■□□□□ 0.94
SNX27-204ENST00000458013 ADGBQ8N7X0 1667 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 GUCY1A3Q02108 690 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 CDHR1Q96JP9 859 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 DHX36Q9H2U1 1008 aaKnown RBP20.9■□□□□ 0.94
SNX27-204ENST00000458013 SCAF8Q9UPN6 1271 aaKnown RBP20.9■□□□□ 0.94
SNX27-204ENST00000458013 AURKCQ9UQB9 309 aa20.9■□□□□ 0.94
SNX27-204ENST00000458013 TMEM2Q9UHN6 1383 aa20.89■□□□□ 0.94
SNX27-204ENST00000458013 RNF123Q5XPI4 1314 aa20.89■□□□□ 0.94
SNX27-204ENST00000458013 ZRANB2O95218 330 aaKnown RBP eCLIP20.89■□□□□ 0.94
SNX27-204ENST00000458013 TDP2O95551 362 aa20.89■□□□□ 0.94
SNX27-204ENST00000458013 HSPA8P11142 646 aaKnown RBP20.89■□□□□ 0.94
SNX27-204ENST00000458013 WRNIP1Q96S55 665 aa20.89■□□□□ 0.94
SNX27-204ENST00000458013 ECE2O60344 883 aa20.89■□□□□ 0.94
SNX27-204ENST00000458013 SERPIND1P05546 499 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms