RNA–Protein interactions for RNA: ENST00000450428.5

RAB11FIP3-205, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2 BASIC

Gene RAB11FIP3, Length 3,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-205ENST00000450428 PCDHB13Q9Y5F0 798 aa12.96□□□□□ -0.33
RAB11FIP3-205ENST00000450428 CETN3O15182 167 aa12.96□□□□□ -0.33
RAB11FIP3-205ENST00000450428 DNAJC3Q13217 504 aa12.96□□□□□ -0.33
RAB11FIP3-205ENST00000450428 RIPK1Q13546 671 aa12.96□□□□□ -0.33
RAB11FIP3-205ENST00000450428 EXOC3L1Q86VI1 746 aa12.96□□□□□ -0.33
RAB11FIP3-205ENST00000450428 RTFDC1Q9BY42 306 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP3-205ENST00000450428 CCSER1Q9C0I3 900 aa12.96□□□□□ -0.33
RAB11FIP3-205ENST00000450428 RHBDL2Q9NX52 303 aa12.96□□□□□ -0.33
RAB11FIP3-205ENST00000450428 CICQ96RK0 1608 aaPredicted RBP12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 TDP2O95551 362 aa12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 PYGBP11216 843 aa12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 GALCP54803 685 aa12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 EIF3BP55884 814 aaKnown RBP12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 FKBP3Q00688 224 aaKnown RBP12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 LRRC55Q6ZSA7 311 aa12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 TAOK1Q7L7X3 1001 aa12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 ZNF513Q8N8E2 541 aaPredicted RBP12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 PHC3Q8NDX5 983 aa12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 ATP8B4Q8TF62 1192 aa12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 CNKSR1Q969H4 720 aa12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 ERP44Q9BS26 406 aa12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 PITPNM3Q9BZ71 974 aa12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 MYLK2Q9H1R3 596 aa12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 CUEDC2Q9H467 287 aa12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 MTRF1LQ9UGC7 380 aaKnown RBP12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 ARL2BPQ9Y2Y0 163 aa12.96□□□□□ -0.34
RAB11FIP3-205ENST00000450428 MYH4Q9Y623 1939 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 COL5A3P25940 1745 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 ANKRD63C9JTQ0 380 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 LRRN2O75325 713 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 RTN3O95197 1032 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 MYBP10242 640 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 RPL21P46778 160 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 PTDSS1P48651 473 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 MARCKSL1P49006 195 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 CDK8P49336 464 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 SETDB1Q15047 1291 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 KIAA1755Q5JYT7 1200 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 DBNDD1Q9H9R9 158 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 CCDC188H7C350 402 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 FESP07332 822 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 FGRP09769 529 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 BNIP1Q12981 228 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 CALCRLQ16602 461 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 FAM26FQ5R3K3 315 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 C6orf118Q5T5N4 469 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 ZNF746Q6NUN9 644 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 PHLDB2Q86SQ0 1253 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 DGKHQ86XP1 1220 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 GBP5Q96PP8 586 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 CRAMP1Q96RY5 1269 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 C7orf25Q9BPX7 421 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 TMEM59LQ9UK28 342 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 CHD4Q14839 1912 aa12.95□□□□□ -0.34
RAB11FIP3-205ENST00000450428 SRRM3A6NNA2 597 aaPredicted RBP12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 E9PMD0 336 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 FLOT1O75955 427 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 PRPHP41219 470 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 ROR2Q01974 943 aaKnown RBP12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 GRB10Q13322 594 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 CUL3Q13618 768 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 AUHQ13825 339 aaKnown RBP12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 NONOQ15233 471 aaKnown RBP eCLIP12.94□□□□□ -0.343e-6■□□□□ 9.9
RAB11FIP3-205ENST00000450428 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 ZC2HC1CQ53FD0 456 aaPredicted RBP12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 TRIM74Q86UV6 250 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 TRIM73Q86UV7 250 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 ACTRT1Q8TDG2 376 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 PIGOQ8TEQ8 1089 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 TMEM47Q9BQJ4 181 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 IKZF4Q9H2S9 585 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 SLCO1B3Q9NPD5 702 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 ASIC3Q9UHC3 531 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 DCTN4Q9UJW0 460 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 A6NHS1 94 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 GM2AP17900 193 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 KCNA3P22001 575 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 SP100P23497 879 aaPredicted RBP12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 NR2F2P24468 414 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 MESDQ14696 234 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 CYP4F22Q6NT55 531 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 USP17L2Q6R6M4 530 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 UNC13DQ70J99 1090 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 ARHGAP22Q7Z5H3 698 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 VPS36Q86VN1 386 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 SLC35G2Q8TBE7 412 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 MMTAG2Q9BU76 263 aaKnown RBP12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 ALG13Q9NP73 1137 aaKnown RBP12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 HDAC9Q9UKV0 1011 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 FLT1P17948 1338 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 KLRF2D3W0D1 207 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 RNF8O76064 485 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 PEX5P50542 639 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 PPP4CP60510 307 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 COASYQ13057 564 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 SLMAPQ14BN4 828 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 KYNUQ16719 465 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 TBC1D25Q3MII6 688 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 KRT79Q5XKE5 535 aa12.94□□□□□ -0.34
RAB11FIP3-205ENST00000450428 ECHDC2Q86YB7 292 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms