RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 SRGAP2CP0DJJ0 459 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 GHRP10912 638 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 AFMP43652 599 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 UBE2HP62256 183 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 BFSP2Q13515 415 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 CAPSQ13938 189 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 MFSD5Q6N075 450 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 RPAINQ86UA6 219 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 ZNF397Q8NF99 534 aaPredicted RBP10.88□□□□□ -0.67
CCDC171-203ENST00000449575 ENGASEQ8NFI3 743 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 CELF4Q9BZC1 486 aaKnown RBP10.88□□□□□ -0.67
CCDC171-203ENST00000449575 IFT122Q9HBG6 1241 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 STK17AQ9UEE5 414 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 PRKAG2Q9UGJ0 569 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 PYCARDQ9ULZ3 195 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 COL4A3BPQ9Y5P4 624 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 ADGRA3Q8IWK6 1321 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 NR1I2O75469 434 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 TMOD1P28289 359 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 MAGEA10P43363 369 aaPredicted RBP10.88□□□□□ -0.67
CCDC171-203ENST00000449575 SYKP43405 635 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 GIT2Q14161 759 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 FMR1NBQ8N0W7 255 aaPredicted RBP10.88□□□□□ -0.67
CCDC171-203ENST00000449575 SECISBP2LQ93073 1101 aaKnown RBP10.88□□□□□ -0.67
CCDC171-203ENST00000449575 DNAJC19Q96DA6 116 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 BLZF1Q9H2G9 400 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 KCNF1Q9H3M0 494 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 KBTBD4Q9NVX7 518 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 USP20Q9Y2K6 914 aa10.88□□□□□ -0.67
CCDC171-203ENST00000449575 TRIOBPQ9H2D6 2365 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 GOLGA6L4A6NEF3 574 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 SLC26A4O43511 780 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 ZNF202O95125 648 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 LPIN1Q14693 890 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 FAM26DQ5JW98 314 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 FBXO47Q5MNV8 452 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 IER5Q5VY09 327 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 IQUBQ8NA54 791 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 RNF149Q8NC42 400 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 PSPC1Q8WXF1 523 aaKnown RBP10.87□□□□□ -0.67
CCDC171-203ENST00000449575 DDX12PQ92771 950 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 ERCC4Q92889 916 aaPredicted RBP10.87□□□□□ -0.67
CCDC171-203ENST00000449575 NOC2LQ9Y3T9 749 aaKnown RBP10.87□□□□□ -0.67
CCDC171-203ENST00000449575 TRPV2Q9Y5S1 764 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 NR2E3Q9Y5X4 410 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 GBF1Q92538 1859 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 CHD9Q3L8U1 2897 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 PRR29P0C7W0 189 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 DNM2P50570 870 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 SV2BQ7L1I2 683 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 RSPH3Q86UC2 560 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 MCPH1Q8NEM0 835 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 NLRP7Q8WX94 980 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 PPME1Q9Y570 386 aa10.87□□□□□ -0.67
CCDC171-203ENST00000449575 TRIP11Q15643 1979 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 EDN1P05305 212 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 GUCY2CP25092 1073 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 CD52P31358 61 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 CUL4BQ13620 913 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 NME8Q8N427 588 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 CCDC155Q8N6L0 562 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 HPS3Q969F9 1004 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 TTLL13PA6NNM8 815 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 PEX3P56589 373 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 FAM228AQ86W67 206 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 KCTD17Q8N5Z5 321 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 DBF4BQ8NFT6 615 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 PAGE5Q96GU1 130 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 SCLT1Q96NL6 688 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 JPH2Q9BR39 696 aaPredicted RBP10.86□□□□□ -0.67
CCDC171-203ENST00000449575 FGFBP2Q9BYJ0 223 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 TRIM9Q9C026 710 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 ZHX3Q9H4I2 956 aa10.86□□□□□ -0.67
CCDC171-203ENST00000449575 LRRIQ4A6NIV6 560 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 C9orf50Q5SZB4 431 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 KRBA2Q6ZNG9 492 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 GLIS3Q8NEA6 775 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 TCP11Q8WWU5 503 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.85□□□□□ -0.67
CCDC171-203ENST00000449575 TBC1D7Q9P0N9 293 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 TTC3P53804 2025 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 M0QZ92 97 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 GAS2O43903 313 aaKnown RBP10.85□□□□□ -0.67
CCDC171-203ENST00000449575 CAND2O75155 1236 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 CLSTN1O94985 981 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 KRT18P05783 430 aaKnown RBP10.85□□□□□ -0.67
CCDC171-203ENST00000449575 CCDC192P0DO97 292 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 TNNT1P13805 278 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 DARSP14868 501 aaKnown RBP10.85□□□□□ -0.67
CCDC171-203ENST00000449575 EIF4BP23588 611 aaKnown RBP10.85□□□□□ -0.67
CCDC171-203ENST00000449575 NPTX2P47972 431 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 CRYBB1P53674 252 aaPredicted RBP10.85□□□□□ -0.67
CCDC171-203ENST00000449575 FPGSQ05932 587 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 FAM160A1Q05DH4 1040 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 NFX1Q12986 1120 aaKnown RBP10.85□□□□□ -0.67
CCDC171-203ENST00000449575 TMEM199Q8N511 208 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 FIZ1Q96SL8 496 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 FUCA2Q9BTY2 467 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 TNMDQ9H2S6 317 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 TMX1Q9H3N1 280 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms