RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 BAP1Q92560 729 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 CARD10Q9BWT7 1032 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 MARCOQ9UEW3 520 aaPredicted RBP13.29□□□□□ -0.28
UBE3B-204ENST00000449510 PPP1R12AO14974 1030 aaPredicted RBP13.29□□□□□ -0.28
UBE3B-204ENST00000449510 AKAP3O75969 853 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 SKIP12755 728 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 BFSP1Q12934 665 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 SPRED3Q2MJR0 410 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 LMBRD2Q68DH5 695 aaPredicted RBP13.29□□□□□ -0.28
UBE3B-204ENST00000449510 CASC4Q6P4E1 433 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 MSL3Q8N5Y2 521 aaKnown RBP13.29□□□□□ -0.28
UBE3B-204ENST00000449510 BLOC1S4Q9NUP1 217 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 SLAIN2Q9P270 581 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 GGA1Q9UJY5 639 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 C15orf41Q9Y2V0 281 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 AKR1B1P15121 316 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 SOX5P35711 763 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 WDR44Q5JSH3 913 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 LRP10Q7Z4F1 713 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 PARD3BQ8TEW8 1205 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 PARVGQ9HBI0 331 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 TRPA1O75762 1119 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 GNAT1P11488 350 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 EPHB1P54762 984 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 GPC5P78333 572 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 FIGNQ5HY92 759 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 PHLDB3Q6NSJ2 640 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 FBXO11Q86XK2 927 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 ZNF564Q8TBZ8 553 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-204ENST00000449510 SCFD1Q8WVM8 642 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 FAM161BQ96MY7 647 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 INPP4AQ96PE3 977 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-204ENST00000449510 SH3GL3Q99963 347 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 MAGED2Q9UNF1 606 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-204ENST00000449510 CCDC195A0A1B0GUA6 201 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 FOXN3O00409 490 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-204ENST00000449510 AGTP01019 485 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 MXI1P50539 228 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 CDR2Q01850 454 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 PIP4K2CQ8TBX8 421 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 TEKT4Q8WW24 435 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 KRT35Q92764 455 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 PNMA5Q96PV4 448 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 MTA3Q9BTC8 594 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 GINM1Q9NU53 330 aa13.28□□□□□ -0.28
UBE3B-204ENST00000449510 BSDC1Q9NW68 430 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-204ENST00000449510 TMEM131LA2VDJ0 1609 aa13.27□□□□□ -0.28
UBE3B-204ENST00000449510 EME2A4GXA9 379 aaPredicted RBP13.27□□□□□ -0.28
UBE3B-204ENST00000449510 CBX6O95503 412 aa13.27□□□□□ -0.28
UBE3B-204ENST00000449510 CREB1P16220 341 aa13.27□□□□□ -0.28
UBE3B-204ENST00000449510 CD58P19256 250 aa13.27□□□□□ -0.28
UBE3B-204ENST00000449510 CCND1P24385 295 aa13.27□□□□□ -0.28
UBE3B-204ENST00000449510 NSFP46459 744 aaKnown RBP13.27□□□□□ -0.28
UBE3B-204ENST00000449510 KDSRQ06136 332 aa13.27□□□□□ -0.28
UBE3B-204ENST00000449510 FUT2Q10981 343 aa13.27□□□□□ -0.28
UBE3B-204ENST00000449510 MIPOL1Q8TD10 442 aa13.27□□□□□ -0.28
UBE3B-204ENST00000449510 PLA2G12BQ9BX93 195 aa13.27□□□□□ -0.28
UBE3B-204ENST00000449510 ATP6V0A4Q9HBG4 840 aa13.27□□□□□ -0.28
UBE3B-204ENST00000449510 PPARGC1AQ9UBK2 798 aaKnown RBP13.27□□□□□ -0.28
UBE3B-204ENST00000449510 SERPINB13Q9UIV8 391 aa13.27□□□□□ -0.28
UBE3B-204ENST00000449510 EMSYQ7Z589 1322 aa13.27□□□□□ -0.28
UBE3B-204ENST00000449510 RASSF10A6NK89 507 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 KCNQ2O43526 872 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 FGFR2P21802 821 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 CHRNA3P32297 505 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 CASP5P51878 434 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 BASP1P80723 227 aaKnown RBP13.27□□□□□ -0.29
UBE3B-204ENST00000449510 MAPK7Q13164 816 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 CLUL1Q15846 466 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 ANKRD20A2Q5SQ80 823 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 ANKRD20A1Q5TYW2 823 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 CEP128Q6ZU80 1094 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 ZBED8Q8IZ13 594 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 GSDMBQ8TAX9 411 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 SLC20A1Q8WUM9 679 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 SHCBP1LQ9BZQ2 653 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 NYXQ9GZU5 481 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 LARSQ9P2J5 1176 aaKnown RBP13.27□□□□□ -0.29
UBE3B-204ENST00000449510 MCM8Q9UJA3 840 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 SUGT1Q9Y2Z0 365 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 PPFIA2O75334 1257 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 TTLL1O95922 423 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 DRD4P21917 467 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 SERPINB4P48594 390 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 MARCKSL1P49006 195 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 IRX1P78414 480 aaPredicted RBP13.27□□□□□ -0.29
UBE3B-204ENST00000449510 PDE1CQ14123 709 aaPredicted RBP13.27□□□□□ -0.29
UBE3B-204ENST00000449510 SPARCL1Q14515 664 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 PRUNE1Q86TP1 453 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 SLFN12Q8IYM2 578 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.27□□□□□ -0.29
UBE3B-204ENST00000449510 FBXO41Q8TF61 875 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 ACSF2Q96CM8 615 aaPredicted RBP13.27□□□□□ -0.29
UBE3B-204ENST00000449510 NAF1Q96HR8 494 aaKnown RBP13.27□□□□□ -0.29
UBE3B-204ENST00000449510 NGLY1Q96IV0 654 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 EDEM3Q9BZQ6 932 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 INTS2Q9H0H0 1204 aaKnown RBP13.27□□□□□ -0.29
UBE3B-204ENST00000449510 TAS2R14Q9NYV8 317 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 TMEM94Q12767 1356 aa13.27□□□□□ -0.29
UBE3B-204ENST00000449510 DIP2CQ9Y2E4 1556 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms