RNA–Protein interactions for RNA: ENST00000449186.2

RPRD1B-202, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-202ENST00000449186 FSIP1Q8NA03 581 aa12.18□□□□□ -0.46
RPRD1B-202ENST00000449186 USP38Q8NB14 1042 aa12.18□□□□□ -0.46
RPRD1B-202ENST00000449186 HPS3Q969F9 1004 aa12.18□□□□□ -0.46
RPRD1B-202ENST00000449186 DNAJC19Q96DA6 116 aa12.18□□□□□ -0.46
RPRD1B-202ENST00000449186 FGFBP2Q9BYJ0 223 aa12.18□□□□□ -0.46
RPRD1B-202ENST00000449186 PBX4Q9BYU1 374 aa12.18□□□□□ -0.46
RPRD1B-202ENST00000449186 INO80BQ9C086 356 aaPredicted RBP12.18□□□□□ -0.46
RPRD1B-202ENST00000449186 IKZF4Q9H2S9 585 aa12.18□□□□□ -0.46
RPRD1B-202ENST00000449186 ZHX3Q9H4I2 956 aa12.18□□□□□ -0.46
RPRD1B-202ENST00000449186 STK17AQ9UEE5 414 aa12.18□□□□□ -0.46
RPRD1B-202ENST00000449186 KCNH3Q9ULD8 1083 aa12.18□□□□□ -0.46
RPRD1B-202ENST00000449186 SQORQ9Y6N5 450 aa12.18□□□□□ -0.46
RPRD1B-202ENST00000449186 COL4A6Q14031 1691 aa12.18□□□□□ -0.46
RPRD1B-202ENST00000449186 TTC3P53804 2025 aa12.18□□□□□ -0.46
RPRD1B-202ENST00000449186 MEIS3P2A8K0S8 358 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 GPR182O15218 404 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 ASAP2O43150 1006 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 ACTN4O43707 911 aaKnown RBP12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 BAIAP3O94812 1187 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 KRT18P05783 430 aaKnown RBP12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 AFMP43652 599 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 PHKA2P46019 1235 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 KCNJ6P48051 423 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 TFDP1Q14186 410 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 UBXN11Q5T124 520 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 CDCA2Q69YH5 1023 aaPredicted RBP12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 SV2BQ7L1I2 683 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 SRGAP1Q7Z6B7 1085 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 HERC6Q8IVU3 1022 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 CRIPAKQ8N1N5 446 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 DDX12PQ92771 950 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 KIFAP3Q92845 792 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 APBB2Q92870 758 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 CCDC113Q9H0I3 377 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 TSPYL2Q9H2G4 693 aaPredicted RBP12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 BLZF1Q9H2G9 400 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 FAM13BQ9NYF5 915 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 TBC1D7Q9P0N9 293 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 PIN4Q9Y237 131 aaKnown RBP12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 HPSEQ9Y251 543 aa12.17□□□□□ -0.46
RPRD1B-202ENST00000449186 C9IYK1 514 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 FGFR1P11362 822 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 PLS3P13797 630 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 ATF7P17544 494 aaPredicted RBP12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 ARF4P18085 180 aaPredicted RBP12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 NMT1P30419 496 aaKnown RBP12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 NAMPTP43490 491 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 FXR1P51114 621 aaKnown RBP eCLIP12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 LRIT3Q3SXY7 679 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 EEF1DP3Q658K8 133 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 SFR1Q86XK3 245 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 RNF169Q8NCN4 708 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 GLIS3Q8NEA6 775 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 DEPTORQ8TB45 409 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 LPPQ93052 612 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 DRC1Q96MC2 740 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 FIZ1Q96SL8 496 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 EIF2AQ9BY44 585 aaKnown RBP12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 NKX2-4Q9H2Z4 354 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 RGS18Q9NS28 235 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 AGPAT5Q9NUQ2 364 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 RNF19AQ9NV58 838 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 HCSTQ9UBK5 93 aa12.16□□□□□ -0.46
RPRD1B-202ENST00000449186 SZT2Q5T011 3432 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 FAM237AA0A1B0GTK4 181 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 A0A1W2PPC1 479 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 A0A1W2PQ27 194 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 A0A1W2PQ64 194 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 A0A1W2PQD8 194 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 DENND3A2RUS2 1198 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 FAM13AO94988 1023 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 GJB5O95377 273 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 AMHP03971 560 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 SFPQP23246 707 aaKnown RBP eCLIP12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 ZNF131P52739 623 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 CDC42EP1Q00587 391 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 CUL4BQ13620 913 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 ZC2HC1CQ53FD0 456 aaPredicted RBP12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 ODR4Q5SWX8 454 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 NT5DC1Q5TFE4 455 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 TWF2Q6IBS0 349 aaKnown RBP12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 Q7L0L9 218 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 KCTD17Q8N5Z5 321 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 MYCT1Q8N699 235 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 IQUBQ8NA54 791 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 TMEM161BQ8NDZ6 487 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 MRPS27Q92552 414 aaKnown RBP12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 TOP1MTQ969P6 601 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 PAGE5Q96GU1 130 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 IFT74Q96LB3 600 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 CXCL16Q9H2A7 254 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 FZD8Q9H461 694 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 KMT5AQ9NQR1 393 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 KBTBD4Q9NVX7 518 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 HES2Q9Y543 173 aa12.15□□□□□ -0.46
RPRD1B-202ENST00000449186 PRKCBP05771 671 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms