RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 MIER3Q7Z3K6 550 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 KRT25Q7Z3Z0 450 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 TMC7Q7Z402 723 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 ALYREFQ86V81 257 aaKnown RBP15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 NOSTRINQ8IVI9 506 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 NLRP7Q8WX94 980 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 FBXL18Q96ME1 805 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 TCF25Q9BQ70 676 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 FOXP1Q9H334 677 aaPredicted RBP15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 UNC45AQ9H3U1 944 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 ENTPD7Q9NQZ7 604 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 RNF19AQ9NV58 838 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 HCSTQ9UBK5 93 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 MYO10Q9HD67 2058 aa15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 TRIOO75962 3097 aa15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 CHMP2AO43633 222 aa15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 SKIP12755 728 aa15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 ALDH7A1P49419 539 aaKnown RBP15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 TOB1P50616 345 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 ZXDAP98168 799 aa15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 NONOQ15233 471 aaKnown RBP eCLIP15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 PLPP4Q5VZY2 271 aa15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 ANKRD54Q6NXT1 300 aa15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 ZNF598Q86UK7 904 aaKnown RBP15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 RPGRIP1Q96KN7 1286 aa15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 PRRX2Q99811 253 aa15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 JPH2Q9BR39 696 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 TRAIPQ9BWF2 469 aa15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 MRPL9Q9BYD2 267 aaKnown RBP15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 S1PR5Q9H228 398 aa15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 CHMP5Q9NZZ3 219 aa15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 CIZ1Q9ULV3 898 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-213ENST00000448520 IGKV6-21A0A0C4DH24 114 aa15.36■□□□□ 0.05
PDLIM2-213ENST00000448520 TMEM221A6NGB7 291 aa15.36■□□□□ 0.05
PDLIM2-213ENST00000448520 M0R296 226 aa15.36■□□□□ 0.05
PDLIM2-213ENST00000448520 TECP42680 631 aa15.36■□□□□ 0.05
PDLIM2-213ENST00000448520 NHLH1Q02575 133 aa15.36■□□□□ 0.05
PDLIM2-213ENST00000448520 UGCGQ16739 394 aa15.36■□□□□ 0.05
PDLIM2-213ENST00000448520 B3GNT9Q6UX72 402 aa15.36■□□□□ 0.05
PDLIM2-213ENST00000448520 ZNF410Q86VK4 478 aa15.36■□□□□ 0.05
PDLIM2-213ENST00000448520 MRPL43Q8N983 215 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-213ENST00000448520 RNF169Q8NCN4 708 aa15.36■□□□□ 0.05
PDLIM2-213ENST00000448520 VN1R2Q8NFZ6 395 aa15.36■□□□□ 0.05
PDLIM2-213ENST00000448520 PBXIP1Q96AQ6 731 aa15.36■□□□□ 0.05
PDLIM2-213ENST00000448520 ZDBF2Q9HCK1 2354 aa15.36■□□□□ 0.05
PDLIM2-213ENST00000448520 DKC1O60832 514 aaKnown RBP eCLIP15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 TDP2O95551 362 aa15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 SFPQP23246 707 aaKnown RBP eCLIP15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 NUCB2P80303 420 aa15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 SMC1AQ14683 1233 aaKnown RBP15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 MTERF2Q49AM1 385 aa15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 TPRNQ4KMQ1 711 aa15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 CLLU1OSQ5K130 101 aa15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 SYCE2Q6PIF2 218 aa15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 EXOC8Q8IYI6 725 aa15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 SLC39A11Q8N1S5 342 aa15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 CASP10Q92851 521 aa15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 ZNF668Q96K58 619 aaPredicted RBP15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 MBOAT7Q96N66 472 aa15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 CEP89Q96ST8 783 aa15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 SEPT9Q9UHD8 586 aaPredicted RBP15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 TCHHQ07283 1943 aa15.35■□□□□ 0.05
PDLIM2-213ENST00000448520 DDX11L8A8MPP1 907 aa15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 HIDE1A8MVS5 230 aa15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 MAFO75444 373 aaPredicted RBP15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 STBD1O95210 358 aa15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 PSMC5P62195 406 aa15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 RBM10P98175 930 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 SIGLEC14Q08ET2 396 aa15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 GIT2Q14161 759 aa15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 LETM2Q2VYF4 491 aa15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 CES5AQ6NT32 575 aa15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 SUGP1Q8IWZ8 645 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 HELQQ8TDG4 1101 aa15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 GJA10Q969M2 543 aa15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 TMEM169Q96HH4 297 aa15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 FAM20AQ96MK3 541 aa15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 SUCLA2Q9P2R7 463 aaPredicted RBP15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 NR2E1Q9Y466 385 aa15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 PCDHB6Q9Y5E3 794 aa15.34■□□□□ 0.05
PDLIM2-213ENST00000448520 A0A087WZ62 844 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 C2orf71A6NGG8 1288 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 ZNF623O75123 536 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 CXCL14O95715 111 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 FGFR4P22455 802 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 PHKA2P46019 1235 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 MRE11P49959 708 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 BCAR1P56945 870 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 ITIH3Q06033 890 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 DRP2Q13474 957 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 ZNF174Q15697 407 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 TWF2Q6IBS0 349 aaKnown RBP15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 BRAPQ7Z569 592 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 NEK8Q86SG6 692 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 TMEM87AQ8NBN3 555 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 ETNPPLQ8TBG4 499 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 NECTIN4Q96NY8 510 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 FDXACB1Q9BRP7 624 aaPredicted RBP15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 TFIP11Q9UBB9 837 aaKnown RBP15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 DDX25Q9UHL0 483 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms