RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 TDRD12Q587J7 1177 aaKnown RBP9.99□□□□□ -0.81
HDAC6-209ENST00000440653 C10orf76Q5T2E6 689 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 ZNF746Q6NUN9 644 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-209ENST00000440653 FBXO38Q6PIJ6 1188 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 RSRC2Q7L4I2 434 aaKnown RBP9.99□□□□□ -0.81
HDAC6-209ENST00000440653 NLRX1Q86UT6 975 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 SLC9A9Q8IVB4 645 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 TPH2Q8IWU9 490 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 C12orf56Q8IXR9 622 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 SMAP1Q8IYB5 467 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-209ENST00000440653 MYCT1Q8N699 235 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 ANKRD13CQ8N6S4 541 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 CYP2W1Q8TAV3 490 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 TSC1Q92574 1164 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 RUBCNQ92622 972 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 VTI1AQ96AJ9 217 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 RNPC3Q96LT9 517 aaKnown RBP9.99□□□□□ -0.81
HDAC6-209ENST00000440653 CHP1Q99653 195 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 PDCD2LQ9BRP1 358 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 TEX13BQ9BXU2 312 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 GBP3Q9H0R5 595 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 ST6GALNAC4Q9H4F1 302 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 TMEM206Q9H813 350 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 PXMP2Q9NR77 195 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 RNF146Q9NTX7 359 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 RGL1Q9NZL6 768 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 TMOD4Q9NZQ9 345 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 TBC1D7Q9P0N9 293 aa9.99□□□□□ -0.81
HDAC6-209ENST00000440653 CXXC1Q9P0U4 656 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-209ENST00000440653 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-209ENST00000440653 CTAGE15A4D2H0 777 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 MAPK13O15264 365 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 PPP1R37O75864 691 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 GFPT2O94808 682 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 CTAGE8P0CG41 777 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 MCM3P25205 808 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 CCND3P30281 292 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-209ENST00000440653 PSMC2P35998 433 aaKnown RBP9.98□□□□□ -0.81
HDAC6-209ENST00000440653 QARSP47897 775 aaKnown RBP9.98□□□□□ -0.81
HDAC6-209ENST00000440653 KLK7P49862 253 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 RPS6P62753 249 aaKnown RBP9.98□□□□□ -0.81
HDAC6-209ENST00000440653 AMPD2Q01433 879 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 RAD51AP2Q09MP3 1159 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 KCNH2Q12809 1159 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 ASIC2Q16515 512 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 GNPTABQ3T906 1256 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 GBP6Q6ZN66 633 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 RRAGAQ7L523 313 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 CTAGE6Q86UF2 777 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 VPS36Q86VN1 386 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 CTAGE4Q8IX94 777 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 C4orf19Q8IY42 314 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 FAM186BQ8IYM0 893 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 RNF10Q8N5U6 811 aaKnown RBP9.98□□□□□ -0.81
HDAC6-209ENST00000440653 REPS2Q8NFH8 660 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 TIFAQ96CG3 184 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 FBXL18Q96ME1 805 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 TRERF1Q96PN7 1200 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 SENP7Q9BQF6 1050 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 GANQ9H2C0 597 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 ACAD9Q9H845 621 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 RAVER2Q9HCJ3 691 aaKnown RBP9.98□□□□□ -0.81
HDAC6-209ENST00000440653 PRDM5Q9NQX1 630 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-209ENST00000440653 ANKEF1Q9NU02 776 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 COL20A1Q9P218 1284 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 ARHGAP20Q9P2F6 1191 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 GUCA1BQ9UMX6 200 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 ADAMTS5Q9UNA0 930 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 ATP11BQ9Y2G3 1177 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 FRMD4BQ9Y2L6 1034 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 NFASCO94856 1347 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 PLXNB2O15031 1838 aa9.98□□□□□ -0.81
HDAC6-209ENST00000440653 MYH9P35579 1960 aaKnown RBP9.97□□□□□ -0.81
HDAC6-209ENST00000440653 CCDC151A5D8V7 595 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 RSPH10B2B2RC85 870 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 H0YCG3 227 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 K7ENM7 598 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 ERLIN1O75477 346 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 PRPF6O94906 941 aaKnown RBP9.97□□□□□ -0.81
HDAC6-209ENST00000440653 RSPH10BP0C881 870 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 ARP10275 920 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 CYP2B6P20813 491 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 DSG3P32926 999 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 COPB2P35606 906 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 PBX2P40425 430 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 PSMC5P62195 406 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 ITIH3Q06033 890 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 ENPEPQ07075 957 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 CACNB2Q08289 660 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-209ENST00000440653 BRD3Q15059 726 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 EXOC3L4Q17RC7 722 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 ERCC6LQ2NKX8 1250 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 SH3D19Q5HYK7 790 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 ODR4Q5SWX8 454 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 TEX35Q5T0J7 233 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 ARHGEF16Q5VV41 709 aa9.97□□□□□ -0.81
HDAC6-209ENST00000440653 PAPD7Q5XG87 772 aaKnown RBP9.97□□□□□ -0.81
HDAC6-209ENST00000440653 SNRNP48Q6IEG0 339 aaKnown RBP9.97□□□□□ -0.81
HDAC6-209ENST00000440653 SAMD1Q6SPF0 538 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-209ENST00000440653 PADI6Q6TGC4 694 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms