RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 TRIM49CP0CI26 452 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 PRPF4BQ13523 1007 aaKnown RBP13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 PEX26Q7Z412 305 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 DAAM2Q86T65 1068 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 METTL14Q9HCE5 456 aaKnown RBP13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 VAV3Q9UKW4 847 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 ASTN1O14525 1302 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 MYH7BA7E2Y1 1941 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 H2AFZP0C0S5 128 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 PAK2Q13177 524 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 ARHGAP44Q17R89 818 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 H2AFVQ71UI9 128 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 MAATS1Q7Z4T9 603 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 ANKRD23Q86SG2 305 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 DDX42Q86XP3 938 aaKnown RBP eCLIP13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 MAB21L3Q8N8X9 362 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 CASKIN2Q8WXE0 1202 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 INPP4AQ96PE3 977 aaPredicted RBP13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 SH3GL2Q99962 352 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 SH2D3AQ9BRG2 576 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 OSBPL7Q9BZF2 842 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 H0YIN7 160 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 SLITRK3O94933 977 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 APBA3O96018 575 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 TNNC1P63316 161 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 NNTQ13423 1086 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 EPHA7Q15375 998 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 GLE1Q53GS7 698 aaKnown RBP13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 ODR4Q5SWX8 454 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 MIGA2Q7L4E1 593 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 ADAT2Q7Z6V5 191 aaKnown RBP13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 NLRP14Q86W24 1093 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 FAM178BQ8IXR5 827 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 GMCL1Q96IK5 515 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 WDR18Q9BV38 432 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 DDX47Q9H0S4 455 aaKnown RBP13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 TGFB1I1O43294 461 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 TBC1D10BQ4KMP7 808 aaPredicted RBP13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 KIAA1755Q5JYT7 1200 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 EPM2AIP1Q7L775 607 aaPredicted RBP13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 HS2ST1Q7LGA3 356 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 GLYCTKQ8IVS8 523 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 USP38Q8NB14 1042 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 MYCBPAPQ8TBZ2 947 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 PLCB1Q9NQ66 1216 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 ZBTB21Q9ULJ3 1066 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 BZW2Q9Y6E2 419 aaKnown RBP13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 CDK5RAP2Q96SN8 1893 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 MAP3K13O43283 966 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 SMNDC1O75940 238 aaKnown RBP eCLIP13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 LINGO3P0C6S8 592 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 CNGA1P29973 690 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 STAT1P42224 750 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 CTCFP49711 727 aaPredicted RBP13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 OTOP1Q7RTM1 612 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 GMCL1P1Q8NEA9 526 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 KCNV2Q8TDN2 545 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 PARVGQ9HBI0 331 aa13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 SCAF8Q9UPN6 1271 aaKnown RBP13.21□□□□□ -0.29
SEMA3F-206ENST00000434342 GCOM1H8Y6P7 765 aaPredicted RBP13.21□□□□□ -0.3
SEMA3F-206ENST00000434342 POLR2MP0CAP2 368 aa13.21□□□□□ -0.3
SEMA3F-206ENST00000434342 PSMC2P35998 433 aaKnown RBP13.21□□□□□ -0.3
SEMA3F-206ENST00000434342 HOOK2Q96ED9 719 aa13.21□□□□□ -0.3
SEMA3F-206ENST00000434342 ZNF570Q96NI8 536 aa13.21□□□□□ -0.3
SEMA3F-206ENST00000434342 BLOC1S6Q9UL45 172 aa13.21□□□□□ -0.3
SEMA3F-206ENST00000434342 GOLGA8KD6RF30 607 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 EVI5O60447 810 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 LRRN2O75325 713 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 ATP6V1G1O75348 118 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 HSPA1LP34931 641 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 IFI16Q16666 785 aaKnown RBP13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 LRRC23Q53EV4 343 aaPredicted RBP13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 CC2D2BQ6DHV5 1058 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 NCAPG2Q86XI2 1143 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 METTL13Q8N6R0 699 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 HSD17B14Q9BPX1 270 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 TRIM31Q9BZY9 425 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 FBXO28Q9NVF7 368 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 TMOD2Q9NZR1 351 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 NHSQ6T4R5 1651 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 KRIT1O00522 736 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 DDX3XO00571 662 aaKnown RBP eCLIP13.2□□□□□ -0.34e-6■■□□□ 12.4
SEMA3F-206ENST00000434342 CAPN15O75808 1086 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 ATP6V1G2O95670 118 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 CIITAP33076 1130 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 POLE2P56282 527 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 ALS2CLQ60I27 953 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 CWF19L1Q69YN2 538 aaKnown RBP13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 POLR3CQ9BUI4 534 aaPredicted RBP13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 PCIF1Q9H4Z3 704 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 ARHGEF10LQ9HCE6 1279 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 OSGEPQ9NPF4 335 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 SERPINA10Q9UK55 444 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 DNAJC12Q9UKB3 198 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 FRMD4BQ9Y2L6 1034 aa13.2□□□□□ -0.3
SEMA3F-206ENST00000434342 PPIP5K2O43314 1243 aa13.19□□□□□ -0.3
SEMA3F-206ENST00000434342 EXOC3O60645 756 aa13.19□□□□□ -0.3
SEMA3F-206ENST00000434342 SETSIPP0DME0 302 aa13.19□□□□□ -0.3
SEMA3F-206ENST00000434342 ARP10275 920 aa13.19□□□□□ -0.3
SEMA3F-206ENST00000434342 GALCP54803 685 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms