RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 KANK2Q63ZY3 851 aa7.53□□□□□ -1.2
USP54-206ENST00000433394 PJA1Q8NG27 643 aa7.53□□□□□ -1.2
USP54-206ENST00000433394 PMM1Q92871 262 aa7.53□□□□□ -1.2
USP54-206ENST00000433394 TIFAQ96CG3 184 aa7.53□□□□□ -1.2
USP54-206ENST00000433394 ZSWIM3Q96MP5 696 aa7.53□□□□□ -1.2
USP54-206ENST00000433394 WDR92Q96MX6 357 aa7.53□□□□□ -1.2
USP54-206ENST00000433394 Q9UFV3 132 aa7.53□□□□□ -1.2
USP54-206ENST00000433394 CFAP20Q9Y6A4 193 aaKnown RBP7.53□□□□□ -1.2
USP54-206ENST00000433394 OAS3Q9Y6K5 1087 aaKnown RBP7.53□□□□□ -1.2
USP54-206ENST00000433394 CCDC154A6NI56 674 aa7.52□□□□□ -1.21
USP54-206ENST00000433394 FAM227AF5H4B4 570 aa7.52□□□□□ -1.21
USP54-206ENST00000433394 FBLN1P23142 703 aa7.52□□□□□ -1.21
USP54-206ENST00000433394 MC3RP41968 323 aa7.52□□□□□ -1.21
USP54-206ENST00000433394 NCKAP1LP55160 1127 aa7.52□□□□□ -1.21
USP54-206ENST00000433394 MARCH10Q8NA82 808 aaPredicted RBP7.52□□□□□ -1.21
USP54-206ENST00000433394 NRG4Q8WWG1 115 aa7.52□□□□□ -1.21
USP54-206ENST00000433394 GFM2Q969S9 779 aaKnown RBP7.52□□□□□ -1.21
USP54-206ENST00000433394 ZBTB8AQ96BR9 441 aa7.52□□□□□ -1.21
USP54-206ENST00000433394 LIN37Q96GY3 246 aaPredicted RBP7.52□□□□□ -1.21
USP54-206ENST00000433394 C11orf84Q9BUA3 381 aaPredicted RBP7.52□□□□□ -1.21
USP54-206ENST00000433394 OSBPL6Q9BZF3 934 aa7.52□□□□□ -1.21
USP54-206ENST00000433394 KCND1Q9NSA2 647 aa7.52□□□□□ -1.21
USP54-206ENST00000433394 RIPOR2Q9Y4F9 1068 aa7.52□□□□□ -1.21
USP54-206ENST00000433394 PCDHA5Q9Y5H7 936 aa7.52□□□□□ -1.21
USP54-206ENST00000433394 ANO9A1A5B4 782 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 H3BML4 177 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 N4BP3O15049 544 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 ENDOD1O94919 500 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 ADCY8P40145 1251 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 WASP42768 502 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 MCAMP43121 646 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 MEOX1P50221 254 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 FOXO4P98177 505 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 SAFB2Q14151 953 aaKnown RBP eCLIP7.51□□□□□ -1.21
USP54-206ENST00000433394 NOMO1Q15155 1222 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 LONRF3Q496Y0 759 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 TRMT10BQ6PF06 316 aaKnown RBP7.51□□□□□ -1.21
USP54-206ENST00000433394 B3GNT9Q6UX72 402 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 CCDC149Q6ZUS6 474 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 GAREM2Q75VX8 874 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 TTC7BQ86TV6 843 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 LYSMD2Q8IV50 215 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 SLC41A1Q8IVJ1 513 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 RTKN2Q8IZC4 609 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 ZBTB34Q8NCN2 500 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 UIMC1Q96RL1 719 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 ACO2Q99798 780 aaKnown RBP7.51□□□□□ -1.21
USP54-206ENST00000433394 GORASP1Q9BQQ3 440 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 PRDM12Q9H4Q4 367 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 MANSC1Q9H8J5 431 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 CNTD2Q9H8S5 307 aa7.51□□□□□ -1.21
USP54-206ENST00000433394 SLC16A6O15403 523 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 AKR1B10O60218 316 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 PRAMEF4O60810 478 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 IL18BPO95998 194 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 CELA3BP08861 270 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 ATF2P15336 505 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 IRAK1P51617 712 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 CDR1P51861 262 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 CACNB3P54284 484 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 PER3P56645 1201 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 FAM193AP78312 1265 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 ADAM9Q13443 819 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 PHF19Q5T6S3 580 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 DARS2Q6PI48 645 aaKnown RBP7.5□□□□□ -1.21
USP54-206ENST00000433394 DAAM2Q86T65 1068 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 STK32CQ86UX6 486 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 FAM129CQ86XR2 697 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 EXOC8Q8IYI6 725 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 FBXO15Q8NCQ5 510 aaPredicted RBP7.5□□□□□ -1.21
USP54-206ENST00000433394 SVIPQ8NHG7 77 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 MTFMTQ96DP5 389 aaKnown RBP7.5□□□□□ -1.21
USP54-206ENST00000433394 TNIP3Q96KP6 325 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 L2HGDHQ9H9P8 463 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 DNAI1Q9UI46 699 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 MBD1Q9UIS9 605 aaPredicted RBP7.5□□□□□ -1.21
USP54-206ENST00000433394 SERPINB13Q9UIV8 391 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 PLA2G2DQ9UNK4 145 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 FAM50BQ9Y247 325 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 VWA7Q9Y334 891 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 PMF1-BGLAPU3KQ54 211 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 RPTORQ8N122 1335 aa7.5□□□□□ -1.21
USP54-206ENST00000433394 LRRC10BA6NIK2 292 aa7.49□□□□□ -1.21
USP54-206ENST00000433394 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.49□□□□□ -1.21
USP54-206ENST00000433394 HTRA2O43464 458 aaPredicted RBP7.49□□□□□ -1.21
USP54-206ENST00000433394 SEC24DO94855 1032 aaPredicted RBP7.49□□□□□ -1.21
USP54-206ENST00000433394 ZBED1O96006 694 aa7.49□□□□□ -1.21
USP54-206ENST00000433394 HMGCRP04035 888 aa7.49□□□□□ -1.21
USP54-206ENST00000433394 ECHS1P30084 290 aa7.49□□□□□ -1.21
USP54-206ENST00000433394 MGAT2Q10469 447 aa7.49□□□□□ -1.21
USP54-206ENST00000433394 CHST15Q7LFX5 561 aaPredicted RBP7.49□□□□□ -1.21
USP54-206ENST00000433394 DRC7Q8IY82 874 aa7.49□□□□□ -1.21
USP54-206ENST00000433394 PRR18Q8N4B5 295 aa7.49□□□□□ -1.21
USP54-206ENST00000433394 GPR156Q8NFN8 814 aa7.49□□□□□ -1.21
USP54-206ENST00000433394 RIN2Q8WYP3 895 aaPredicted RBP7.49□□□□□ -1.21
USP54-206ENST00000433394 UHRF1Q96T88 793 aaPredicted RBP7.49□□□□□ -1.21
USP54-206ENST00000433394 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
USP54-206ENST00000433394 DDX20Q9UHI6 824 aaKnown RBP7.49□□□□□ -1.21
USP54-206ENST00000433394 PAPLNO95428 1278 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 LTA4HP09960 611 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms