RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 NR1H4Q96RI1 486 aaPredicted RBP12.47□□□□□ -0.41
RIMKLA-202ENST00000431473 PRDM15P57071 1507 aaPredicted RBP12.47□□□□□ -0.41
RIMKLA-202ENST00000431473 PLEKHG3A1L390 1219 aa12.47□□□□□ -0.41
RIMKLA-202ENST00000431473 LIFRP42702 1097 aa12.47□□□□□ -0.41
RIMKLA-202ENST00000431473 OR6B3Q8NGW1 331 aa12.47□□□□□ -0.41
RIMKLA-202ENST00000431473 DCPSQ96C86 337 aaKnown RBP12.47□□□□□ -0.41
RIMKLA-202ENST00000431473 CCDC17Q96LX7 622 aa12.47□□□□□ -0.41
RIMKLA-202ENST00000431473 ATP8B3O60423 1300 aa12.47□□□□□ -0.41
RIMKLA-202ENST00000431473 COG1Q8WTW3 980 aa12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 KCNF1Q9H3M0 494 aa12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 EIF2AK2P19525 551 aaKnown RBP12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 AARSP49588 968 aaKnown RBP eCLIP12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 PIH1D3Q9NQM4 214 aaKnown RBP12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 PCSK1NQ9UHG2 260 aa12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 TMEM247A6NEH6 219 aa12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 USP17L5A8MUK1 530 aa12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 PJA2O43164 708 aa12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 ZFXP17010 805 aaPredicted RBP12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 TTC8Q8TAM2 541 aa12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 LRRC1Q9BTT6 524 aa12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 WDR17Q8IZU2 1322 aa12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 ARHGAP10A1A4S6 786 aa12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 FAM83BQ5T0W9 1011 aa12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 BRIP1Q9BX63 1249 aa12.46□□□□□ -0.41
RIMKLA-202ENST00000431473 TARSL2A2RTX5 802 aaKnown RBP12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 STXBP3O00186 592 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 VSNL1P62760 191 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 ALCAMQ13740 583 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 DDIASQ8IXT1 998 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 ZNF579Q8NAF0 562 aaKnown RBP12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 CYP26B1Q9NR63 512 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 BCS1LQ9Y276 419 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 ADGRG1Q9Y653 693 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 MIF4GDA9UHW6 222 aaKnown RBP12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 ZSCAN20P17040 1043 aaPredicted RBP12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 PGM1P36871 562 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 TBC1D9BQ66K14 1250 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 C1orf228Q6PIY5 440 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 SFR1Q86XK3 245 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 ADD3Q9UEY8 706 aaKnown RBP12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 PTCH1Q13635 1447 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 ABCB11O95342 1321 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 POTEFA5A3E0 1075 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 POTEIP0CG38 1075 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 OLFML2BQ68BL8 750 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 POTEGQ6S5H5 508 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 SRLQ86TD4 932 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 RAD54LQ92698 747 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 USP21Q9UK80 565 aa12.46□□□□□ -0.42
RIMKLA-202ENST00000431473 ERVK-7P63135 1459 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 UBE4BO95155 1302 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 KRT17Q04695 432 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 MXD4Q14582 209 aaPredicted RBP12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 DRAP1Q14919 205 aaPredicted RBP12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 ANKMY2Q8IV38 441 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 SH3RF3Q8TEJ3 882 aaPredicted RBP12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 IFT43Q96FT9 208 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 MRPL40Q9NQ50 206 aaKnown RBP12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 PIK3R2O00459 728 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 ZSCAN9O15535 394 aaPredicted RBP12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 HDAC4P56524 1084 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 ARMCX2Q7L311 632 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 TBC1D10CQ8IV04 446 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 CPVLQ9H3G5 476 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 KLHL11Q9NVR0 708 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 GNA15P30679 374 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 ATP6V1E1P36543 226 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 ARSEP51690 589 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 ROR1Q01973 937 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 CUL3Q13618 768 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 KIAA1841Q6NSI8 718 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 PRPF38AQ8NAV1 312 aaKnown RBP12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 SPATA4Q8NEY3 305 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 ESRRBO95718 433 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 CALB1P05937 261 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 OTULINQ96BN8 352 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 FAM213AQ9BRX8 229 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 ATP7BP35670 1465 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 LOC102724428A0A0B4J2F2 783 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 POTEB3A0JP26 581 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 POTECB2RU33 542 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 E5RI56 91 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 CHRNA3P32297 505 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 SIK1P57059 783 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 NME3Q13232 169 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 POTEBQ6S5H4 581 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 DDX28Q9NUL7 540 aaKnown RBP12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 LEMD3Q9Y2U8 911 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 SASH1O94885 1247 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 CHN1P15882 459 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 MRPS15P82914 257 aaKnown RBP12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 PTPN12Q05209 780 aaKnown RBP12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 TXNRD1Q16881 649 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 WNT8AQ9H1J5 351 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 LY9Q9HBG7 655 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 CDC42BPAQ5VT25 1732 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 PYGLP06737 847 aa12.45□□□□□ -0.42
RIMKLA-202ENST00000431473 HIC1Q14526 733 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms