RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 SEPT8Q92599 483 aa7.4□□□□□ -1.22
SMC6-205ENST00000430591 PLIN2Q99541 437 aa7.4□□□□□ -1.22
SMC6-205ENST00000430591 FDXACB1Q9BRP7 624 aaPredicted RBP7.4□□□□□ -1.22
SMC6-205ENST00000430591 MMTAG2Q9BU76 263 aaKnown RBP7.4□□□□□ -1.22
SMC6-205ENST00000430591 FOXP1Q9H334 677 aaPredicted RBP7.4□□□□□ -1.22
SMC6-205ENST00000430591 MINDY3Q9H8M7 445 aa7.4□□□□□ -1.22
SMC6-205ENST00000430591 GPRC5CQ9NQ84 441 aa7.4□□□□□ -1.22
SMC6-205ENST00000430591 TOR4AQ9NXH8 423 aa7.4□□□□□ -1.22
SMC6-205ENST00000430591 AKT3Q9Y243 479 aa7.4□□□□□ -1.22
SMC6-205ENST00000430591 COL1A2P08123 1366 aa7.4□□□□□ -1.22
SMC6-205ENST00000430591 UNC80Q8N2C7 3258 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 TRANK1O15050 2925 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 BRWD1Q9NSI6 2320 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 IGKV6-21A0A0C4DH24 114 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 ABHD14A-ACY1A0A1B0GW23 586 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 VPS37CA5D8V6 355 aaPredicted RBP7.39□□□□□ -1.23
SMC6-205ENST00000430591 MEIS3P2A8K0S8 358 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 TBX3O15119 743 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 SPTLC1O15269 473 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 MARCH6O60337 910 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 LPXNO60711 386 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 USO1O60763 962 aaKnown RBP7.39□□□□□ -1.23
SMC6-205ENST00000430591 BAIAP3O94812 1187 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 GJB5O95377 273 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 P4HBP07237 508 aaKnown RBP7.39□□□□□ -1.23
SMC6-205ENST00000430591 OR52Z1P0C646 297 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 ACTN1P12814 892 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 YWHABP31946 246 aaKnown RBP7.39□□□□□ -1.23
SMC6-205ENST00000430591 QARSP47897 775 aaKnown RBP7.39□□□□□ -1.23
SMC6-205ENST00000430591 SLC26A2P50443 739 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 GPC3P51654 580 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 RESTQ13127 1097 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 GNL2Q13823 731 aaKnown RBP7.39□□□□□ -1.23
SMC6-205ENST00000430591 IKBKEQ14164 716 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 SAFBQ15424 915 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMC6-205ENST00000430591 PAN2Q504Q3 1202 aaKnown RBP7.39□□□□□ -1.23
SMC6-205ENST00000430591 XKR9Q5GH70 373 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 XKR3Q5GH77 459 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 LARP1BQ659C4 914 aaKnown RBP7.39□□□□□ -1.23
SMC6-205ENST00000430591 TAF2Q6P1X5 1199 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 CATSPER3Q86XQ3 398 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 CRIPAKQ8N1N5 446 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 MICALL1Q8N3F8 863 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 PRR7Q8TB68 274 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 ARNTL2Q8WYA1 636 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 BSNDQ8WZ55 320 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 CEP170P1Q96L14 293 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 NLRP4Q96MN2 994 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 SLC9A7Q96T83 725 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 HSD17B14Q9BPX1 270 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 NIFKQ9BYG3 293 aaKnown RBP7.39□□□□□ -1.23
SMC6-205ENST00000430591 RC3H2Q9HBD1 1191 aaKnown RBP7.39□□□□□ -1.23
SMC6-205ENST00000430591 CYP26B1Q9NR63 512 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 RNF19AQ9NV58 838 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 LIMD1Q9UGP4 676 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 PCDHA12Q9UN75 941 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 ST3GAL5Q9UNP4 418 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 PCDHA11Q9Y5I1 949 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 CLIC4Q9Y696 253 aa7.39□□□□□ -1.23
SMC6-205ENST00000430591 SPTBN5Q9NRC6 3674 aaKnown RBP7.39□□□□□ -1.23
SMC6-205ENST00000430591 KDM3AQ9Y4C1 1321 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 CFAP99D6REC4 459 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 E9PMD0 336 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 K7ELQ4 463 aaPredicted RBP7.38□□□□□ -1.23
SMC6-205ENST00000430591 B4GALT3O60512 393 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 CAND2O75155 1236 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 MAFO75444 373 aaPredicted RBP7.38□□□□□ -1.23
SMC6-205ENST00000430591 DGAT1O75907 488 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 EDN1P05305 212 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 SRGAP2CP0DJJ0 459 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 FGFR1P11362 822 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 FOSL2P15408 326 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 ATF7P17544 494 aaPredicted RBP7.38□□□□□ -1.23
SMC6-205ENST00000430591 IGFBP4P22692 258 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 PBX3P40426 434 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 HTRA4P83105 476 aaPredicted RBP7.38□□□□□ -1.23
SMC6-205ENST00000430591 TBC1D8BQ0IIM8 1120 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 PAK2Q13177 524 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 DSC3Q14574 896 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 RAB30Q15771 203 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 FOXD4L6Q3SYB3 417 aaPredicted RBP7.38□□□□□ -1.23
SMC6-205ENST00000430591 SPECC1Q5M775 1068 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 FAM102BQ5T8I3 360 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 FOXD4L3Q6VB84 417 aaPredicted RBP7.38□□□□□ -1.23
SMC6-205ENST00000430591 USP49Q70CQ1 688 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 CDR2LQ86X02 465 aaPredicted RBP7.38□□□□□ -1.23
SMC6-205ENST00000430591 RHPN2Q8IUC4 686 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 RDM1Q8NG50 284 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 PRPF31Q8WWY3 499 aaKnown RBP7.38□□□□□ -1.23
SMC6-205ENST00000430591 TOP1MTQ969P6 601 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 FAM167AQ96KS9 214 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 ADAM2Q99965 735 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 DHX33Q9H6R0 707 aaKnown RBP7.38□□□□□ -1.23
SMC6-205ENST00000430591 SLC28A3Q9HAS3 691 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 NRBP2Q9NSY0 501 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 SUCLA2Q9P2R7 463 aaPredicted RBP7.38□□□□□ -1.23
SMC6-205ENST00000430591 MSRAQ9UJ68 235 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 PCDHGC5Q9Y5F6 944 aa7.38□□□□□ -1.23
SMC6-205ENST00000430591 TCF20Q9UGU0 1960 aaKnown RBP7.37□□□□□ -1.23
SMC6-205ENST00000430591 RALGAPA2Q2PPJ7 1873 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms