RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 TRAIPQ9BWF2 469 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 C1QTNF1Q9BXJ1 281 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 FAM105AQ9NUU6 356 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 TBC1D13Q9NVG8 400 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 USP15Q9Y4E8 981 aaPredicted RBP13.18□□□□□ -0.3
HDAC4-202ENST00000430200 USP34Q70CQ2 3546 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 MYO15AQ9UKN7 3530 aa13.18□□□□□ -0.3
HDAC4-202ENST00000430200 MYO10Q9HD67 2058 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 DOCK6Q96HP0 2047 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 VPS13AQ96RL7 3174 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 NEMFO60524 1076 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 ZSCAN20P17040 1043 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-202ENST00000430200 XBP1P17861 261 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 BCAR1P56945 870 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 CAPSQ13938 189 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 NBR1Q14596 966 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 CALCRLQ16602 461 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 AMHR2Q16671 573 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 PUS10Q3MIT2 529 aaKnown RBP13.17□□□□□ -0.3
HDAC4-202ENST00000430200 SYCE2Q6PIF2 218 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 CATSPER4Q7RTX7 472 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 FERMT3Q86UX7 667 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 SLC7A3Q8WY07 619 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 HSD17B14Q9BPX1 270 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 APOL5Q9BWW9 433 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 NRDE2Q9H7Z3 1164 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 TLE6Q9H808 572 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 MUTYHQ9UIF7 546 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 INPP5FQ9Y2H2 1132 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 DOCK8Q8NF50 2099 aa13.17□□□□□ -0.3
HDAC4-202ENST00000430200 F8W810 466 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 HOXA2O43364 376 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 NCK2O43639 380 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 TSPAN1O60635 241 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 GPR37L1O60883 481 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 ZC3H11AO75152 810 aaKnown RBP eCLIP13.16□□□□□ -0.3
HDAC4-202ENST00000430200 EDN1P05305 212 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 SRGAP2CP0DJJ0 459 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 SPATA31C1P0DKV0 1188 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 RFC5P40937 340 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 TXKP42681 527 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 XKR9Q5GH70 373 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 TMEM31Q5JXX7 168 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 LLGL2Q6P1M3 1020 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 ZNF280BQ86YH2 543 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 TPH2Q8IWU9 490 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 ABI1Q8IZP0 508 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 RNF149Q8NC42 400 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 SMG8Q8ND04 991 aaKnown RBP13.16□□□□□ -0.3
HDAC4-202ENST00000430200 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
HDAC4-202ENST00000430200 SUSD6Q92537 303 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 WASF1Q92558 559 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 EIF2AQ9BY44 585 aaKnown RBP13.16□□□□□ -0.3
HDAC4-202ENST00000430200 ZBP1Q9H171 429 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 TTC12Q9H892 705 aaPredicted RBP13.16□□□□□ -0.3
HDAC4-202ENST00000430200 GPRC5CQ9NQ84 441 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 ENTPD7Q9NQZ7 604 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 AAASQ9NRG9 546 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 PRKAG3Q9UGI9 489 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 LZTS1Q9Y250 596 aa13.16□□□□□ -0.3
HDAC4-202ENST00000430200 MYH15Q9Y2K3 1946 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 CITO14578 2027 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 TTLL13PA6NNM8 815 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 B4GALT5O43286 388 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 MED24O75448 989 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 OFD1O75665 1012 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 DDHD2O94830 711 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 LYPLA2O95372 231 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 CD2BP2O95400 341 aaKnown RBP13.15□□□□□ -0.3
HDAC4-202ENST00000430200 EOMESO95936 686 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 ATP2B1P20020 1258 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 MCM7P33993 719 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 SLC11A1P49279 550 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 RARRES1P49788 294 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 DNM2P50570 870 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 MBTD1Q05BQ5 628 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 KANK3Q6NY19 840 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 FAM43BQ6ZT52 329 aaPredicted RBP13.15□□□□□ -0.3
HDAC4-202ENST00000430200 CDR2LQ86X02 465 aaPredicted RBP13.15□□□□□ -0.3
HDAC4-202ENST00000430200 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 SLFN12Q8IYM2 578 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 ZNF710Q8N1W2 664 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 MICAL1Q8TDZ2 1067 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 PIGOQ8TEQ8 1089 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 CPB2Q96IY4 423 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 MTRQ99707 1265 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 S1PR5Q9H228 398 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 RNF39Q9H2S5 420 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 ZSWIM4Q9H7M6 989 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 CHST12Q9NRB3 414 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 DACT1Q9NYF0 836 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 SPG21Q9NZD8 308 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 HES2Q9Y543 173 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 PCDHB2Q9Y5E7 798 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 ZDBF2Q9HCK1 2354 aa13.15□□□□□ -0.3
HDAC4-202ENST00000430200 C2orf71A6NGG8 1288 aa13.14□□□□□ -0.31
HDAC4-202ENST00000430200 LOC730098B7Z3J9 87 aa13.14□□□□□ -0.31
HDAC4-202ENST00000430200 DCXO43602 365 aa13.14□□□□□ -0.31
HDAC4-202ENST00000430200 ZNF623O75123 536 aa13.14□□□□□ -0.31
HDAC4-202ENST00000430200 GLRA2P23416 452 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms