RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 APEX2Q9UBZ4 518 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 C15orf41Q9Y2V0 281 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 KIAA0391O15091 583 aaKnown RBP11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 NEFHP12036 1026 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 BRAFP15056 766 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 PEX19P40855 299 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 COPS2P61201 443 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 TAF11Q15544 211 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 ODR4Q5SWX8 454 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 ANKRD35Q8N283 1001 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 C18orf8Q96DM3 657 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 THAP2Q9H0W7 228 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 EHMT1Q9H9B1 1298 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 USP40Q9NVE5 1235 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 ATP8B3O60423 1300 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 TBX3O15119 743 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 RWDD2BP57060 319 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 CCDC6Q16204 474 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 CNBD1Q8NA66 436 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 CCDC17Q96LX7 622 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 MOV10L1Q9BXT6 1211 aaKnown RBP11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 NARFQ9UHQ1 456 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 NUP98P52948 1817 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 DOCK2Q92608 1830 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 TMEM120BA0PK00 339 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 ADCY8P40145 1251 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 CASP5P51878 434 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 QRICH1Q2TAL8 776 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 USH1GQ495M9 461 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 CAPRIN2Q6IMN6 1127 aaKnown RBP11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 SAAL1Q96ER3 474 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 STXBP5LQ9Y2K9 1186 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 L3MBTL1Q9Y468 752 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 ARHGEF35A5YM69 484 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 SNX3O60493 162 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 EYA4O95677 639 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 ATF2P15336 505 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 SLC12A3P55017 1021 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 IRX1P78414 480 aaPredicted RBP11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 TSNAXIP1Q2TAA8 658 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 FBXO11Q86XK2 927 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 KIFAP3Q92845 792 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 GRAMD1AQ96CP6 724 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 MLXIPLQ9NP71 852 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 ATP2A2P16615 1042 aaKnown RBP11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 MMP14P50281 582 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 SLFN13Q68D06 897 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 SAMD1Q6SPF0 538 aaPredicted RBP11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 CYFIP1Q7L576 1253 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 KIRREL3Q8IZU9 778 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 GPR101Q96P66 508 aaPredicted RBP11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 PITPNM3Q9BZ71 974 aa11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 SRP68Q9UHB9 627 aaKnown RBP11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 ZNF142P52746 1687 aaPredicted RBP11.57□□□□□ -0.56
ATP2C1-204ENST00000428331 ATP5HO75947 161 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 TRIM49P0CI25 452 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 TRIM49CP0CI26 452 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 LONRF1Q17RB8 773 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 GSTA5Q7RTV2 222 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 PIGWQ7Z7B1 504 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 SEC14L1Q92503 715 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 SERPINB12Q96P63 405 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 ZNF317Q96PQ6 595 aaPredicted RBP11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 TGS1Q96RS0 853 aaKnown RBP11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 ETNK1Q9HBU6 452 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 ABCF3Q9NUQ8 709 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 BCORQ6W2J9 1755 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 PLCH1Q4KWH8 1693 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 NCANO14594 1321 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 RIPK2O43353 540 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 PAX7P23759 505 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 CLEC10AQ8IUN9 316 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 BBOF1Q8ND07 529 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 RNF25Q96BH1 459 aaPredicted RBP11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 SEL1LQ9UBV2 794 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 LRP5O75197 1615 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 O00370 1275 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 RPL21P46778 160 aaKnown RBP11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 VPS41P49754 854 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 GTF2IP78347 998 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 KCTD19Q17RG1 926 aaPredicted RBP11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 TRIM68Q6AZZ1 485 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 MOXD1Q6UVY6 613 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 KIF2BQ8N4N8 673 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 PIGOQ8TEQ8 1089 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 ATXN2LQ8WWM7 1075 aaKnown RBP11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 ZNF653Q96CK0 615 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 ZSWIM1Q9BR11 485 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 ANAPC5Q9UJX4 755 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 EIF3DO15371 548 aaKnown RBP eCLIP11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 NMT1P30419 496 aaKnown RBP11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 COILP38432 576 aaPredicted RBP11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 SNX1Q13596 522 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 TNIP1Q15025 636 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 LNX1Q8TBB1 728 aaPredicted RBP11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 RPS6KC1Q96S38 1066 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 TBK1Q9UHD2 729 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 NR2E1Q9Y466 385 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms