RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 STX6O43752 255 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 EOMESO95936 686 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 RB1P06400 928 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 PDIA4P13667 645 aaKnown RBP12.14□□□□□ -0.47
USP49-204ENST00000423567 POU3F3P20264 500 aaPredicted RBP12.14□□□□□ -0.47
USP49-204ENST00000423567 ARL2P36404 184 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 RAB27AP51159 221 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 PTENP60484 403 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 GPM6BQ13491 265 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 CCDC85BQ15834 202 aaPredicted RBP12.14□□□□□ -0.47
USP49-204ENST00000423567 SPOUT1Q5T280 376 aaKnown RBP12.14□□□□□ -0.47
USP49-204ENST00000423567 MAEAQ7L5Y9 396 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 SPRED2Q7Z698 418 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 CRIPAKQ8N1N5 446 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 AK8Q96MA6 479 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 C11orf84Q9BUA3 381 aaPredicted RBP12.14□□□□□ -0.47
USP49-204ENST00000423567 NT5C3AQ9H0P0 336 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 BHMT2Q9H2M3 363 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 ZSCAN16Q9H4T2 348 aaPredicted RBP12.14□□□□□ -0.47
USP49-204ENST00000423567 AAASQ9NRG9 546 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 LMCD1Q9NZU5 365 aa12.14□□□□□ -0.47
USP49-204ENST00000423567 PTPRSQ13332 1948 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 LRRIQ4A6NIV6 560 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 PP2D1A8MPX8 630 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 H3BNC9 293 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 CYP11B2P19099 503 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 GLRA2P23416 452 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 BMPR1AP36894 532 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 UBA7P41226 1012 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 POU5F1BQ06416 359 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 PPP2R5AQ15172 486 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 SF3A1Q15459 793 aaKnown RBP12.13□□□□□ -0.47
USP49-204ENST00000423567 SKIV2LQ15477 1246 aaKnown RBP12.13□□□□□ -0.47
USP49-204ENST00000423567 IL17AQ16552 155 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 ECHDC2Q86YB7 292 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 ZBTB8OSQ8IWT0 167 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 KCTD17Q8N5Z5 321 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 RASSF8Q8NHQ8 419 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 ASAP3Q8TDY4 903 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 IFT74Q96LB3 600 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 PLVAPQ9BX97 442 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 MFRPQ9BY79 579 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 TMEM117Q9H0C3 514 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 AGPAT5Q9NUQ2 364 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 MTCH2Q9Y6C9 303 aa12.13□□□□□ -0.47
USP49-204ENST00000423567 MRPL42Q9Y6G3 142 aaKnown RBP12.13□□□□□ -0.47
USP49-204ENST00000423567 TTC3P53804 2025 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 C5orf67F2Z3F1 127 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 SLC26A4O43511 780 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 LPXNO60711 386 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 EYA4O95677 639 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 CDC25AP30304 524 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 AXLP30530 894 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 GATMP50440 423 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 RESTQ13127 1097 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 CAPSQ13938 189 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 ECM1Q16610 540 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 NAALADL2Q58DX5 795 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 CABP7Q86V35 215 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 LRRC43Q8N309 656 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 RSPH1Q8WYR4 309 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 KIFAP3Q92845 792 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 CLP1Q92989 425 aaKnown RBP12.12□□□□□ -0.47
USP49-204ENST00000423567 PGBD4Q96DM1 585 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 CALML4Q96GE6 196 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 TRAIPQ9BWF2 469 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 MRPL9Q9BYD2 267 aaKnown RBP12.12□□□□□ -0.47
USP49-204ENST00000423567 NFKBIZQ9BYH8 718 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 C2orf40Q9H1Z8 148 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 GPRC5CQ9NQ84 441 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 FAM105AQ9NUU6 356 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 MTMR6Q9Y217 621 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 PCDHB12Q9Y5F1 795 aa12.12□□□□□ -0.47
USP49-204ENST00000423567 E9PMD0 336 aa12.11□□□□□ -0.47
USP49-204ENST00000423567 SSBP05455 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
USP49-204ENST00000423567 FGFR1P11362 822 aa12.11□□□□□ -0.47
USP49-204ENST00000423567 LONP1P36776 959 aaKnown RBP12.11□□□□□ -0.47
USP49-204ENST00000423567 CSPP1Q1MSJ5 1256 aa12.11□□□□□ -0.47
USP49-204ENST00000423567 TMEM132AQ24JP5 1023 aa12.11□□□□□ -0.47
USP49-204ENST00000423567 TIGD5Q53EQ6 642 aa12.11□□□□□ -0.47
USP49-204ENST00000423567 NOTUMQ6P988 496 aa12.11□□□□□ -0.47
USP49-204ENST00000423567 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.11□□□□□ -0.47
USP49-204ENST00000423567 HACE1Q8IYU2 909 aa12.11□□□□□ -0.47
USP49-204ENST00000423567 DEPTORQ8TB45 409 aa12.11□□□□□ -0.47
USP49-204ENST00000423567 MRPL38Q96DV4 380 aaKnown RBP12.11□□□□□ -0.47
USP49-204ENST00000423567 CCDC51Q96ER9 411 aa12.11□□□□□ -0.47
USP49-204ENST00000423567 MMTAG2Q9BU76 263 aaKnown RBP12.11□□□□□ -0.47
USP49-204ENST00000423567 LMAN2LQ9H0V9 348 aa12.11□□□□□ -0.47
USP49-204ENST00000423567 MINDY3Q9H8M7 445 aa12.11□□□□□ -0.47
USP49-204ENST00000423567 TSPAN1O60635 241 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 ZNF623O75123 536 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 LAG3P18627 525 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 TXLNAP40222 546 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 NAMPTP43490 491 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 CEBPZQ03701 1054 aaKnown RBP12.1□□□□□ -0.47
USP49-204ENST00000423567 MBTD1Q05BQ5 628 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 HYIQ5T013 277 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 GLB1LQ6UWU2 654 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 ZNF598Q86UK7 904 aaKnown RBP12.1□□□□□ -0.47
USP49-204ENST00000423567 CNNM3Q8NE01 707 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms