RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 MAGEA9P43362 315 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 RNASE9P60153 205 aaKnown RBP9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 PTENP60484 403 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 SNRPFP62306 86 aaKnown RBP9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 DNAJC21Q5F1R6 531 aaKnown RBP9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 SPDYCQ5MJ68 293 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 C11orf63Q6NUN7 778 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 PADI6Q6TGC4 694 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 INTS8Q75QN2 995 aaKnown RBP9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 PALB2Q86YC2 1186 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 SH2D3CQ8N5H7 860 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 SAMD3Q8N6K7 520 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 SLC35G2Q8TBE7 412 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 CLEC4DQ8WXI8 215 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 CTNNBL1Q8WYA6 563 aaPredicted RBP9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 LRRC45Q96CN5 670 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 PSMD1Q99460 953 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 TIPINQ9BVW5 301 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 TXLNGYQ9BZA5 131 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 FBXO28Q9NVF7 368 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 COL20A1Q9P218 1284 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 ZNF219Q9P2Y4 722 aaPredicted RBP9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 PLAAQ9Y263 795 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 UBIAD1Q9Y5Z9 338 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 CITO14578 2027 aa9.46□□□□□ -0.89
TRIM49D1-201ENST00000420869 SSC5DA1L4H1 1573 aa9.46□□□□□ -0.9
TRIM49D1-201ENST00000420869 PDCD11Q14690 1871 aaKnown RBP9.46□□□□□ -0.9
TRIM49D1-201ENST00000420869 PLXNA1Q9UIW2 1896 aa9.46□□□□□ -0.9
TRIM49D1-201ENST00000420869 EMSYQ7Z589 1322 aa9.46□□□□□ -0.9
TRIM49D1-201ENST00000420869 CLRN2A0PK11 232 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 TMCO5BA8MYB1 307 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 KRIT1O00522 736 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 EXOC3O60645 756 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 P4HBP07237 508 aaKnown RBP9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 NR1D1P20393 614 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 RARRES1P49788 294 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 GTF2BQ00403 316 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 SPP2Q13103 211 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 ITGB3BPQ13352 177 aaPredicted RBP9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 MTMR3Q13615 1198 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 DLGAP5Q15398 846 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 CLUL1Q15846 466 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 PPP2R5EQ16537 467 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 PCNX4Q63HM2 1172 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 MIER3Q7Z3K6 550 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 CDAN1Q8IWY9 1227 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 RHOT2Q8IXI1 618 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 IL31RAQ8NI17 732 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 ATP8B4Q8TF62 1192 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 RNPC3Q96LT9 517 aaKnown RBP9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 AGPAT1Q99943 283 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 AP1M1Q9BXS5 423 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 GLIS2Q9BZE0 524 aaPredicted RBP9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 PLEKHA4Q9H4M7 779 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 TMEM206Q9H813 350 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 AGO4Q9HCK5 861 aaKnown RBP9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 FAM114A2Q9NRY5 505 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 LARSQ9P2J5 1176 aaKnown RBP9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 PPP1R9AQ9ULJ8 1098 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 COG5Q9UP83 839 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 SBF1O95248 1867 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 KRT13P13646 458 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 PLS3P13797 630 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 VCAM1P19320 739 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 TNFAIP3P21580 790 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 NCKAP1LP55160 1127 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 DLG4P78352 724 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 PPP3CAQ08209 521 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 ZNF844Q08AG5 666 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 PDCLQ13371 301 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 TKFCQ3LXA3 575 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 AGBL2Q5U5Z8 902 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 MAATS1Q7Z4T9 603 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 TMC3Q7Z5M5 1100 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 DDX42Q86XP3 938 aaKnown RBP eCLIP9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 ARHGEF19Q8IW93 802 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 EFCAB13Q8IY85 973 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 C10orf67Q8IYJ2 551 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 CCDC26Q8TAB7 109 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 PLEKHO2Q8TD55 490 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 BCAS4Q8TDM0 211 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 ACCSQ96QU6 501 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 FAM107BQ9H098 131 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 THAP2Q9H0W7 228 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 KCNH7Q9NS40 1196 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 MAP3K20Q9NYL2 800 aaKnown RBP9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 TAS2R14Q9NYV8 317 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 ZHX2Q9Y6X8 837 aa9.45□□□□□ -0.9
TRIM49D1-201ENST00000420869 ASTN2O75129 1339 aaPredicted RBP9.44□□□□□ -0.9
TRIM49D1-201ENST00000420869 SYNGAP1Q96PV0 1343 aa9.44□□□□□ -0.9
TRIM49D1-201ENST00000420869 RALGAPA2Q2PPJ7 1873 aa9.44□□□□□ -0.9
TRIM49D1-201ENST00000420869 FAM187AA6NFU0 413 aa9.44□□□□□ -0.9
TRIM49D1-201ENST00000420869 MIF4GDA9UHW6 222 aaKnown RBP9.44□□□□□ -0.9
TRIM49D1-201ENST00000420869 FOXN3O00409 490 aaPredicted RBP9.44□□□□□ -0.9
TRIM49D1-201ENST00000420869 WDR46O15213 610 aaKnown RBP9.44□□□□□ -0.9
TRIM49D1-201ENST00000420869 TTI1O43156 1089 aa9.44□□□□□ -0.9
TRIM49D1-201ENST00000420869 PPFIA2O75334 1257 aa9.44□□□□□ -0.9
TRIM49D1-201ENST00000420869 ASNSP08243 561 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms