RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 NPTX2P47972 431 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 PEX3P56589 373 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 SNRPFP62306 86 aaKnown RBP6.54□□□□□ -1.36
HMGB3-202ENST00000419110 SP3Q02447 781 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 PRKCZQ05513 592 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 STRN3Q13033 797 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 PPFIA1Q13136 1202 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 TFDP1Q14186 410 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 PLCB4Q15147 1175 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 ZNF484Q5JVG2 852 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 GJC2Q5T442 439 aaPredicted RBP6.54□□□□□ -1.36
HMGB3-202ENST00000419110 SPECC1LQ69YQ0 1117 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 ANKRD40Q6AI12 368 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 ARMCX5Q6P1M9 558 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 FILIP1Q7Z7B0 1213 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 ZC3H3Q8IXZ2 948 aaKnown RBP6.54□□□□□ -1.36
HMGB3-202ENST00000419110 CCDC112Q8NEF3 446 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 IQCDQ96DY2 449 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 ERO1AQ96HE7 468 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 ZFRQ96KR1 1074 aaKnown RBP6.54□□□□□ -1.36
HMGB3-202ENST00000419110 MED15Q96RN5 788 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 MAP7D2Q96T17 732 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 ZIC5Q96T25 663 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 PCYT2Q99447 389 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 DUSP9Q99956 384 aaKnown RBP6.54□□□□□ -1.36
HMGB3-202ENST00000419110 SH2D3AQ9BRG2 576 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 MKNK1Q9BUB5 465 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 NOC4LQ9BVI4 516 aaKnown RBP6.54□□□□□ -1.36
HMGB3-202ENST00000419110 C2orf40Q9H1Z8 148 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 KCTD10Q9H3F6 313 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 DHX33Q9H6R0 707 aaKnown RBP6.54□□□□□ -1.36
HMGB3-202ENST00000419110 SPC25Q9HBM1 224 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 GPRC5CQ9NQ84 441 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 XPNPEP1Q9NQW7 623 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 FAM184BQ9ULE4 1060 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 TRAF3IP3Q9Y228 551 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 FRMD4BQ9Y2L6 1034 aa6.54□□□□□ -1.36
HMGB3-202ENST00000419110 TRIP11Q15643 1979 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 A0A1W2PQC6 194 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 SFI1A8K8P3 1242 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 MAGEB2O15479 319 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 MAFO75444 373 aaPredicted RBP6.53□□□□□ -1.36
HMGB3-202ENST00000419110 STBD1O95210 358 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 F2P00734 622 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 GNRH1P01148 92 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 HMGCRP04035 888 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 ZNF865P0CJ78 1059 aaPredicted RBP6.53□□□□□ -1.36
HMGB3-202ENST00000419110 CYBAP13498 195 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 KRT13P13646 458 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 PTGS1P23219 599 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 CYP2C19P33261 490 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 PHKA2P46019 1235 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 FLT3LGP49771 235 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 LIG4P49917 911 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 DNM2P50570 870 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 CYP2J2P51589 502 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 EFNA5P52803 228 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 UBXN1Q04323 297 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 MYBPC2Q14324 1141 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 MXD4Q14582 209 aaPredicted RBP6.53□□□□□ -1.36
HMGB3-202ENST00000419110 TARBP2Q15633 366 aaKnown RBP6.53□□□□□ -1.36
HMGB3-202ENST00000419110 CCL14Q16627 93 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 DCAF17Q5H9S7 520 aaPredicted RBP6.53□□□□□ -1.36
HMGB3-202ENST00000419110 CEP135Q66GS9 1140 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 ZNF720Q7Z2F6 126 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 HAUS6Q7Z4H7 955 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 USP37Q86T82 979 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 PPFIBP1Q86W92 1011 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 CNGA4Q8IV77 575 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 C12orf56Q8IXR9 622 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 FAM186BQ8IYM0 893 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 ZNF507Q8TCN5 953 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 BSNDQ8WZ55 320 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 PCMTD1Q96MG8 357 aaPredicted RBP6.53□□□□□ -1.36
HMGB3-202ENST00000419110 SCLT1Q96NL6 688 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 FIZ1Q96SL8 496 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 TUBGCP2Q9BSJ2 902 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 BEGAINQ9BUH8 593 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 KIFC3Q9BVG8 833 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 ARHGAP39Q9C0H5 1083 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 VPS16Q9H269 839 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 BCAS3Q9H6U6 928 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 METTL14Q9HCE5 456 aaKnown RBP6.53□□□□□ -1.36
HMGB3-202ENST00000419110 AGPAT3Q9NRZ7 376 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 INTS13Q9NVM9 706 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 FLRT1Q9NZU1 646 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 ARHGAP28Q9P2N2 729 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 ARMCX3Q9UH62 379 aaPredicted RBP6.53□□□□□ -1.36
HMGB3-202ENST00000419110 TELO2Q9Y4R8 837 aa6.53□□□□□ -1.36
HMGB3-202ENST00000419110 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.53□□□□□ -1.36
HMGB3-202ENST00000419110 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.53□□□□□ -1.361e-8■■□□□ 11.8
HMGB3-202ENST00000419110 TDRD15B5MCY1 1934 aaKnown RBP6.52□□□□□ -1.37
HMGB3-202ENST00000419110 KIAA0391O15091 583 aaKnown RBP6.52□□□□□ -1.37
HMGB3-202ENST00000419110 SEPT4O43236 478 aa6.52□□□□□ -1.37
HMGB3-202ENST00000419110 ZEB2O60315 1214 aa6.52□□□□□ -1.37
HMGB3-202ENST00000419110 EXOC3O60645 756 aa6.52□□□□□ -1.37
HMGB3-202ENST00000419110 KPNA6O60684 536 aa6.52□□□□□ -1.37
HMGB3-202ENST00000419110 FKTNO75072 461 aa6.52□□□□□ -1.37
HMGB3-202ENST00000419110 N4BP1O75113 896 aaKnown RBP6.52□□□□□ -1.37
HMGB3-202ENST00000419110 DUSP11O75319 330 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms