RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 HERVK_113P62684 666 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 TOP3AQ13472 1001 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 NOLC1Q14978 699 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 TM4SF20Q53R12 229 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 TMEM177Q53S58 311 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 TRIM61Q5EBN2 209 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 HDGFL2Q7Z4V5 671 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 TAX1BP1Q86VP1 789 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 NEIL1Q96FI4 390 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 MRFAP1L1Q96HT8 127 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 PUS7Q96PZ0 661 aaKnown RBP4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 CDK5RAP1Q96SZ6 601 aaKnown RBP4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 C1QTNF3Q9BXJ4 246 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 KIAA1683Q9H0B3 1180 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 TMPRSS5Q9H3S3 457 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 NR2E1Q9Y466 385 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 A0A1W2PP64 1363 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 SHPRHQ149N8 1683 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 CGNL1Q0VF96 1302 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 PTPRUQ92729 1446 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 ETV4P43268 484 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 SELENOPP49908 381 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 CD83Q01151 205 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 NFE2L2Q16236 605 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 HS1BP3Q53T59 392 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 ZMAT1Q5H9K5 638 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 TCTN3Q6NUS6 607 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 OVCH1Q7RTY7 1134 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 SPRED1Q7Z699 444 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 NOSTRINQ8IVI9 506 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 DNERQ8NFT8 737 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 ASB15Q8WXK1 588 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 CDK19Q9BWU1 502 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 BTBD2Q9BX70 525 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 AMNQ9BXJ7 453 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 ZSWIM4Q9H7M6 989 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 NCOA5Q9HCD5 579 aaKnown RBP4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 CD248Q9HCU0 757 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 TERF2IPQ9NYB0 399 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 FBXO10Q9UK96 956 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 FAM184BQ9ULE4 1060 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 TSC22D4Q9Y3Q8 395 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 TBX22Q9Y458 520 aa4.97□□□□□ -1.61
HMGB3P20-201ENST00000417997 KIF1AQ12756 1690 aa4.96□□□□□ -1.61
HMGB3P20-201ENST00000417997 NKTRP30414 1462 aaKnown RBP4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 PATE3B3GLJ2 98 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 MATN3O15232 486 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 CDC14BO60729 498 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 TNFRSF1AP19438 455 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 MEOX1P50221 254 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 IRF9Q00978 393 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 RNF151Q2KHN1 245 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 CCDC184Q52MB2 194 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 ABHD17CQ6PCB6 329 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 CXXC5Q7LFL8 322 aaKnown RBP4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 FILIP1Q7Z7B0 1213 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 DDX53Q86TM3 631 aaKnown RBP4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 RTKN2Q8IZC4 609 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 JMYQ8N9B5 988 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 Q8TCH9 128 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 WNK4Q96J92 1243 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 SCYL1Q96KG9 808 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 DPYSL5Q9BPU6 564 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 ZDHHC5Q9C0B5 715 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 OR10A5Q9H207 317 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 SLC12A5Q9H2X9 1139 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 TRIM39Q9HCM9 518 aa4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 ZFR2Q9UPR6 939 aaKnown RBP4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 EDC4Q6P2E9 1401 aaKnown RBP4.96□□□□□ -1.62
HMGB3P20-201ENST00000417997 CD163L1Q9NR16 1453 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 C1QTNF3-AMACRE9PGA6 284 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 M0R2C6 588 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 PLD2O14939 933 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 MUSKO15146 869 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 FOXS1O43638 330 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 OPA1O60313 960 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 MPIG6BO95866 241 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 PPP2R1AP30153 589 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 ZXDAP98168 799 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 WDR43Q15061 677 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 CDSNQ15517 529 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 LARP4Q71RC2 724 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 MORC1Q86VD1 984 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 CALML6Q8TD86 181 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 OR14A2Q96R54 314 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 BOCQ9BWV1 1114 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 KRTAP4-5Q9BYR2 181 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 SAMD15Q9P1V8 674 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 OAZ3Q9UMX2 235 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 B3GALT1Q9Y5Z6 326 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 BLMP54132 1417 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 ANKARQ7Z5J8 1434 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 ADGRL3Q9HAR2 1447 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 USP54Q70EL1 1684 aa4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 MAP2P11137 1827 aaKnown RBP4.95□□□□□ -1.62
HMGB3P20-201ENST00000417997 STRCP1A6NGW2 1772 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 STRCQ7RTU9 1775 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 PIK3C2AO00443 1686 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 A0A0G2JNJ9 132 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 RASSF10A6NK89 507 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms