RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ZNF568Q3ZCX4 644 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 TOR2AQ5JU69 321 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 AMOTL1Q8IY63 956 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 PLA2G15Q8NCC3 412 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 CFHR4Q92496 578 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 CEP89Q96ST8 783 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 IFT122Q9HBG6 1241 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 RTEL1Q9NZ71 1219 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 GPR45Q9Y5Y3 372 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 TNKSO95271 1327 aa5.16□□□□□ -1.58
HMGB1P11-201ENST00000413899 C2orf78A6NCI8 922 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 DAPK3O43293 454 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 LAMTOR5O43504 91 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 MT-CO1P00395 513 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 PLATP00750 562 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 MYBL2P10244 700 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 CNR2P34972 360 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 ADCY7P51828 1080 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 CD69Q07108 199 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 PLEKHG6Q3KR16 790 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 GAGE13Q4V321 117 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 PGM2L1Q6PCE3 622 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 LMBR1LQ6UX01 489 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 ARHGEF18Q6ZSZ5 1173 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 TTLL10Q6ZVT0 673 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 GCDHQ92947 438 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 CHMP4CQ96CF2 233 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 SLC6A15Q9H2J7 730 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 C14orf93Q9H972 538 aaKnown RBP5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 MKS1Q9NXB0 559 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 NR2E1Q9Y466 385 aa5.15□□□□□ -1.59
HMGB1P11-201ENST00000413899 MATN2O00339 956 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 PCDHGA12O60330 932 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 ALDH1L1O75891 902 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 INHBBP09529 407 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 VSIG10L2P0DP72 767 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 HOXA5P20719 270 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 NEK2P51955 445 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 RAC3P60763 192 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 ADAM8P78325 824 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 PCBP2Q15366 365 aaKnown RBP eCLIP5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 ADRM1Q16186 407 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 C19orf54Q5BKX5 351 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 GJC2Q5T442 439 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 MBNL2Q5VZF2 373 aaKnown RBP5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 SLFN13Q68D06 897 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 BTNL9Q6UXG8 535 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 TAS1R1Q7RTX1 841 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 PIK3C3Q8NEB9 887 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 FATE1Q969F0 183 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 NEIL1Q96FI4 390 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 MEGF9Q9H1U4 602 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 SCOCQ9UIL1 159 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 FAM184BQ9ULE4 1060 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 PCDHGA9Q9Y5G4 932 aaKnown RBP5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 PCDHGA8Q9Y5G5 932 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 PCDHGA7Q9Y5G6 932 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 PCDHGA6Q9Y5G7 932 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 PCDHGA3Q9Y5H0 932 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 PCDHGA2Q9Y5H1 932 aa5.14□□□□□ -1.59
HMGB1P11-201ENST00000413899 KLHL33A6NCF5 533 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 PPM1GO15355 546 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 TMEM127O75204 238 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 JUNP05412 331 aaKnown RBP5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 LTA4HP09960 611 aaKnown RBP5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 KIR2DL3P43628 341 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 MGAT5Q09328 741 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 TCIRG1Q13488 830 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 PTPN21Q16825 1174 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 TBC1D10BQ4KMP7 808 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 FBLN7Q53RD9 439 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 ZDHHC14Q8IZN3 488 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 OR14K1Q8NGZ2 314 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 JADE3Q92613 823 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 RABGGTAQ92696 567 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 UIMC1Q96RL1 719 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 LMF1Q96S06 567 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 SMAD5Q99717 465 aaKnown RBP5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 ACE2Q9BYF1 805 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 GREM2Q9H772 168 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 TCF7L1Q9HCS4 588 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 PUF60Q9UHX1 559 aaKnown RBP5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 OAZ3Q9UMX2 235 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 RBM8AQ9Y5S9 174 aaKnown RBP5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 MRFAP1Q9Y605 127 aa5.13□□□□□ -1.59
HMGB1P11-201ENST00000413899 A0A0G2JLL6 359 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 SLC26A4O43511 780 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 PRICKLE3O43900 615 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 ALDH1A2O94788 518 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 OSMP13725 252 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 CR2P20023 1033 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 EPHB1P54762 984 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 WNT3AP56704 352 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 BPIFB4P59827 614 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 ATP2C1P98194 919 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 CDK17Q00537 523 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 MCL1Q07820 350 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 MALLQ13021 153 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 DUSP8Q13202 625 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 TTF1Q15361 905 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms