RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 WDR44Q5JSH3 913 aa10.21□□□□□ -0.78
SMAD9-203ENST00000399275 MB21D2Q8IYB1 491 aaPredicted RBP10.21□□□□□ -0.78
SMAD9-203ENST00000399275 SPATA4Q8NEY3 305 aa10.21□□□□□ -0.78
SMAD9-203ENST00000399275 CDHR1Q96JP9 859 aa10.21□□□□□ -0.78
SMAD9-203ENST00000399275 AIFM3Q96NN9 605 aa10.21□□□□□ -0.78
SMAD9-203ENST00000399275 COL4A3BPQ9Y5P4 624 aa10.21□□□□□ -0.78
SMAD9-203ENST00000399275 RNF17Q9BXT8 1623 aaKnown RBP10.21□□□□□ -0.78
SMAD9-203ENST00000399275 LDHAP00338 332 aaKnown RBP10.21□□□□□ -0.78
SMAD9-203ENST00000399275 GIPC2Q8TF65 315 aa10.21□□□□□ -0.78
SMAD9-203ENST00000399275 ZC3H15Q8WU90 426 aaKnown RBP10.21□□□□□ -0.78
SMAD9-203ENST00000399275 GRAMD1AQ96CP6 724 aa10.21□□□□□ -0.78
SMAD9-203ENST00000399275 PAIP1Q9H074 479 aaKnown RBP10.21□□□□□ -0.78
SMAD9-203ENST00000399275 SNX12Q9UMY4 172 aa10.21□□□□□ -0.78
SMAD9-203ENST00000399275 L1RE1Q9UN81 338 aa10.21□□□□□ -0.78
SMAD9-203ENST00000399275 SH3BP1Q9Y3L3 701 aa10.21□□□□□ -0.78
SMAD9-203ENST00000399275 FAM25AB3EWG3 89 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 FAM25CB3EWG5 89 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 FAM25GB3EWG6 89 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 SNPHO15079 494 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 TJAP1Q5JTD0 557 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 FRA10AC1Q70Z53 315 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 OTUD6AQ7L8S5 288 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 PODNQ7Z5L7 613 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 SIX6OS1Q8N1H7 587 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 SMARCAD1Q9H4L7 1026 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 HPS5Q9UPZ3 1129 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 GCNT3O95395 438 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 PLEKHM3Q6ZWE6 761 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 GPBP1Q86WP2 473 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 FBXL13Q8NEE6 735 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 EXOC7Q9UPT5 735 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 NIP7Q9Y221 180 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMAD9-203ENST00000399275 PGM3O95394 542 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 PCCAP05165 728 aaPredicted RBP10.2□□□□□ -0.78
SMAD9-203ENST00000399275 KLHL12Q53G59 568 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 PPP6R3Q5H9R7 873 aaPredicted RBP10.2□□□□□ -0.78
SMAD9-203ENST00000399275 SWT1Q5T5J6 900 aaKnown RBP10.2□□□□□ -0.78
SMAD9-203ENST00000399275 ADAT2Q7Z6V5 191 aaKnown RBP10.2□□□□□ -0.78
SMAD9-203ENST00000399275 SFR1Q86XK3 245 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 GALNT6Q8NCL4 622 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 SEPT1Q8WYJ6 367 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 LARP4BQ92615 738 aaKnown RBP10.2□□□□□ -0.78
SMAD9-203ENST00000399275 SCYL1Q96KG9 808 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 C2CD2Q9Y426 696 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 IVNS1ABPQ9Y6Y0 642 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 TTC26A0AVF1 554 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 IL2RBP14784 551 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 PEX5P50542 639 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 RUNX1T1Q06455 604 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 ARMC3Q5W041 872 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 FAAH2Q6GMR7 532 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 MMGT1Q8N4V1 131 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 HDAC11Q96DB2 347 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 IRX2Q9BZI1 471 aaPredicted RBP10.2□□□□□ -0.78
SMAD9-203ENST00000399275 ADNPQ9H2P0 1102 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 TMEM245Q9H330 911 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 CHMP1AQ9HD42 196 aaPredicted RBP10.2□□□□□ -0.78
SMAD9-203ENST00000399275 TUFT1Q9NNX1 390 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 ATXN10Q9UBB4 475 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 ATPIF1Q9UII2 106 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 PODXLO00592 558 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 PALMO75781 387 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 MYBL2P10244 700 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 CACNA2D1P54289 1103 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 CTSWP56202 376 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 PRAMEP78395 509 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 CHRNA2Q15822 529 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 GPR141Q7Z602 305 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 NLRP3Q96P20 1036 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 PUS7LQ9H0K6 701 aaKnown RBP10.2□□□□□ -0.78
SMAD9-203ENST00000399275 ATP8A2Q9NTI2 1148 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 CEP72Q9P209 647 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 SPEF1Q9Y4P9 236 aa10.2□□□□□ -0.78
SMAD9-203ENST00000399275 KIF28PB7ZC32 967 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 EXOC3O60645 756 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 S100A6P06703 90 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 RAD9BQ6WBX8 426 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 PLEKHG2Q9H7P9 1386 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 CFAP69A5D8W1 941 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 GNB5O14775 395 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 ECEL1O95672 775 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 AFPP02771 609 aaKnown RBP10.19□□□□□ -0.78
SMAD9-203ENST00000399275 MT-ND3P03897 115 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 ZNF18P17022 549 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 LSP1P33241 339 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 CRLF3Q8IUI8 442 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 NYXQ9GZU5 481 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 ADD3Q9UEY8 706 aaKnown RBP10.19□□□□□ -0.78
SMAD9-203ENST00000399275 MOSPD1Q9UJG1 213 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 HIC1Q14526 733 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 TRIP10Q15642 601 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 RTL3Q8N8U3 475 aaKnown RBP10.19□□□□□ -0.78
SMAD9-203ENST00000399275 SLC10A4Q96EP9 437 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 LRRC1Q9BTT6 524 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 FAM192AQ9GZU8 254 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 BLOC1S6Q9UL45 172 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 PALLDQ8WX93 1383 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 F8VZ95 297 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 H3BQF6 201 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 FAM107AO95990 144 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms