RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 FASTKD5Q7L8L6 764 aaKnown RBP15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 RHPN2Q8IUC4 686 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 STAT5BP51692 787 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 RAD9BQ6WBX8 426 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 SALL1Q9NSC2 1324 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 EXOC1LA0A1B0GW35 172 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 GYPCP04921 128 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 PPP2R5CQ13362 524 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 TFDP2Q14188 446 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 TSNAXIP1Q2TAA8 658 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 TTC13Q8NBP0 860 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 MMP19Q99542 508 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 MXRA8Q9BRK3 442 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 NUP85Q9BW27 656 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 STK33Q9BYT3 514 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 SNX12Q9UMY4 172 aa15.24■□□□□ 0.03
PCDHGA11-201ENST00000398587 UCHL3P15374 230 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 NFIAQ12857 509 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 NFX1Q12986 1120 aaKnown RBP15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 BBS9Q3SYG4 887 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 CENPUQ71F23 418 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 PASD1Q8IV76 773 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 FUCA2Q9BTY2 467 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 A0A1B0GUA9 196 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 ASB14A6NK59 587 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 ZBED1O96006 694 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 GNAT1P11488 350 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 LIG3P49916 1009 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 ST3GAL1Q11201 340 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 SLC15A2Q16348 729 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 CYFIP1Q7L576 1253 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 TTC39CQ8N584 583 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 SPATA4Q8NEY3 305 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 SPATA33Q96N06 139 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 TMEM39BQ9GZU3 492 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 MAFGO15525 162 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 LPXNO60711 386 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 OATP04181 439 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 SRGAP2BP0DMP2 458 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 RPS12P25398 132 aaKnown RBP15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 FMO5P49326 533 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 TMED2Q15363 201 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 DUOXA2Q1HG44 320 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 LMNTD2Q8IXW0 634 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 RAB3IPQ96QF0 476 aaPredicted RBP15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 MKNK1Q9BUB5 465 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 DDX47Q9H0S4 455 aaKnown RBP15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 IL1R1P14778 569 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 GNA15P30679 374 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 BZW1Q7L1Q6 419 aaKnown RBP15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 TRIM42Q8IWZ5 723 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 ERGIC2Q96RQ1 377 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 AGPAT1Q99943 283 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 HSPBP1Q9NZL4 362 aa15.23■□□□□ 0.03
PCDHGA11-201ENST00000398587 IFT88Q13099 833 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 XRRA1Q6P2D8 792 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 MOXD1Q6UVY6 613 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 BBS5Q8N3I7 341 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 POLR3CQ9BUI4 534 aaPredicted RBP15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 WNT8AQ9H1J5 351 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 EHD4Q9H223 541 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 SLITRK6Q9H5Y7 841 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 ZWILCHQ9H900 591 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 GINM1Q9NU53 330 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 APEX2Q9UBZ4 518 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 PLAAQ9Y263 795 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 UBE4BO95155 1302 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 MYBL1P10243 752 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 PLS3P13797 630 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 CHRNA3P32297 505 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 C3orf67Q6ZVT6 689 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 STK38LQ9Y2H1 464 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 A0A1W2PQJ5 194 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 EIF3DO15371 548 aaKnown RBP eCLIP15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 MT-ND3P03897 115 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 RNASELQ05823 741 aaKnown RBP15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 DMTNQ08495 405 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 DSTYKQ6XUX3 929 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 VGLL2Q8N8G2 317 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 MYOZ2Q9NPC6 264 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 ADAM21Q9UKJ8 722 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 ATP8B3O60423 1300 aa15.22■□□□□ 0.03
PCDHGA11-201ENST00000398587 CCDC160A6NGH7 325 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 PFDN6O15212 129 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 MYBP10242 640 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 COL23A1Q86Y22 540 aaPredicted RBP15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 DNAAF3Q8N9W5 541 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 CCDC68Q9H2F9 335 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 BCAP29Q9UHQ4 241 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 TARSL2A2RTX5 802 aaKnown RBP15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 ZNF211Q13398 564 aaPredicted RBP15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 NAA25Q14CX7 972 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 PKN1Q16512 942 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 PYROXD1Q8WU10 500 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 SH2D3AQ9BRG2 576 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 HEMGNQ9BXL5 484 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 IPO11Q9UI26 975 aaKnown RBP15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 FAM187AA6NFU0 413 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 SLC37A4O43826 429 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 DPEP1P16444 411 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms