RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 PALM3A6NDB9 673 aaPredicted RBP7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 CCT6AP40227 531 aaKnown RBP7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 KPNA1P52294 538 aaPredicted RBP7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 AP1B1Q10567 949 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 PDE12Q6L8Q7 609 aaKnown RBP7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 SPARTQ8N0X7 666 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 SMARCAD1Q9H4L7 1026 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 ARFGAP3Q9NP61 516 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 FANCLQ9NW38 375 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 AATFQ9NY61 560 aaKnown RBP eCLIP7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 WDR35Q9P2L0 1181 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 GRID1Q9ULK0 1009 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 DUSP12Q9UNI6 340 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 MYPNQ86TC9 1320 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 LAMA4Q16363 1823 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 YKT6O15498 198 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 STX10O60499 249 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 B4GALT4O60513 344 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 TRPA1O75762 1119 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 FDX1P10109 184 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 ATP1A3P13637 1013 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 CHKAP35790 457 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 RAD52P43351 418 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 EPHB1P54762 984 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 SSRP1Q08945 709 aaKnown RBP7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 WSCD2Q2TBF2 565 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 ANKDD1AQ495B1 522 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 MICU3Q86XE3 530 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 GPR161Q8N6U8 529 aaKnown RBP7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 MLKLQ8NB16 471 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 CARD6Q9BX69 1037 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 GPHNQ9NQX3 736 aaPredicted RBP7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 TBC1D22BQ9NU19 505 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 PPP1R14DQ9NXH3 145 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 MOCS1Q9NZB8 636 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 ZNF624Q9P2J8 865 aaPredicted RBP7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 ASAP2O43150 1006 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 ZW10O43264 779 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 GUCY2FP51841 1108 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 TUBB4BP68371 445 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 CLDN10P78369 228 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 PNOCQ13519 176 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 PSMD6Q15008 389 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 SETMARQ53H47 684 aaPredicted RBP7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 CFAP157Q5JU67 520 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 DACT2Q5SW24 774 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 RESP18Q5W5W9 173 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 C1orf122Q6ZSJ8 110 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 NAT8LQ8N9F0 302 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 GOLM1Q8NBJ4 401 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 OR52K2Q8NGK3 314 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 DYDC1Q8WWB3 177 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 SMARCE1Q969G3 411 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 VPS50Q96JG6 964 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 CATSPER2Q96P56 530 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 FAM126AQ9BYI3 521 aaPredicted RBP7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 EDEM3Q9BZQ6 932 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 HPS5Q9UPZ3 1129 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 PPP2R2CQ9Y2T4 447 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 SLC12A7Q9Y666 1083 aa7.09□□□□□ -1.27
TM9SF4-202ENST00000398022 C17orf113A0A1B0GUU1 675 aa7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 TMEM247A6NEH6 219 aa7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 POTEB2H3BUK9 544 aa7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 EXTL3O43909 919 aa7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 TGDSO95455 350 aa7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 GALNSP34059 522 aa7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 ACTN2P35609 894 aa7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 HNF1BP35680 557 aa7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 ITGA7Q13683 1181 aa7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 BEND6Q5SZJ8 279 aaPredicted RBP7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 FAM180BQ6P0A1 224 aa7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 KIF6Q6ZMV9 814 aa7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 CEP128Q6ZU80 1094 aa7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 MAB21L3Q8N8X9 362 aa7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 STK32BQ9NY57 414 aa7.09□□□□□ -1.28
TM9SF4-202ENST00000398022 A0A0G2JLW4 131 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 ERICH2A1L162 156 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 KIF28PB7ZC32 967 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 KRT14P02533 472 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 PRELPP51888 382 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 DAB2P98082 770 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 STIM1Q13586 685 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 HLTFQ14527 1009 aaKnown RBP eCLIP7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 TMEM67Q5HYA8 995 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 SPECC1LQ69YQ0 1117 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 TTLL7Q6ZT98 887 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 EEPD1Q7L9B9 569 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 C7orf61Q8IZ16 206 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 GOT1L1Q8NHS2 421 aaPredicted RBP7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 SLC13A1Q9BZW2 595 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 IDH1O75874 414 aaKnown RBP7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 GFPT2O94808 682 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 ZAP70P43403 619 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 ATP5OP48047 213 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 PPP2R3AQ06190 1150 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 CETN1Q12798 172 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 DYNC1I2Q13409 638 aaKnown RBP7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 SMAD4Q13485 552 aaKnown RBP7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 GNA13Q14344 377 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 KCNB1Q14721 858 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms