RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 PDZD4Q76G19 769 aaPredicted RBP13.31□□□□□ -0.28
SOCS6-201ENST00000397942 NLRP14Q86W24 1093 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.31□□□□□ -0.28
SOCS6-201ENST00000397942 DNAJC7Q99615 494 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 MAD2L2Q9UI95 211 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 AKT3Q9Y243 479 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 SMIM22K7EJ46 135 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 SCP2P22307 547 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 SEC24CP53992 1094 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 SLC10A5Q5PT55 438 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 C1orf54Q8WWF1 131 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 MYCBPQ99417 103 aaPredicted RBP13.31□□□□□ -0.28
SOCS6-201ENST00000397942 ADGRB2O60241 1585 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 GCKP35557 465 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 NFIAQ12857 509 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 DARS2Q6PI48 645 aaKnown RBP13.31□□□□□ -0.28
SOCS6-201ENST00000397942 HPCAL4Q9UM19 191 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 ALG6Q9Y672 507 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 LRRC10BA6NIK2 292 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 TJP3O95049 919 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 CCND2P30279 289 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 KIAA1755Q5JYT7 1200 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 SNRNP48Q6IEG0 339 aaKnown RBP13.31□□□□□ -0.28
SOCS6-201ENST00000397942 MMGT1Q8N4V1 131 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 LRRN4CLQ8ND94 238 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 AGPAT1Q99943 283 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 APEX2Q9UBZ4 518 aa13.31□□□□□ -0.28
SOCS6-201ENST00000397942 A0A1W2PQJ5 194 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 RFX1P22670 979 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 MARK3P27448 753 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 GRB10Q13322 594 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 PPP6R3Q5H9R7 873 aaPredicted RBP13.3□□□□□ -0.28
SOCS6-201ENST00000397942 HACE1Q8IYU2 909 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 KCTD6Q8NC69 237 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 CHMP6Q96FZ7 201 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 ARHGAP20Q9P2F6 1191 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 PEX19P40855 299 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 RNASELQ05823 741 aaKnown RBP13.3□□□□□ -0.28
SOCS6-201ENST00000397942 LRRC14Q15048 493 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 FAM47CQ5HY64 1035 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 STRIP1Q5VSL9 837 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 HHIPL2Q6UWX4 724 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 IFT122Q9HBG6 1241 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 MYBP10242 640 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 VEGFAP15692 232 aaPredicted RBP13.3□□□□□ -0.28
SOCS6-201ENST00000397942 ANXA13P27216 316 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 SFNP31947 248 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 TRAPPC11Q7Z392 1133 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 RBM41Q96IZ5 413 aaKnown RBP13.3□□□□□ -0.28
SOCS6-201ENST00000397942 FEM1BQ9UK73 627 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.3□□□□□ -0.28
SOCS6-201ENST00000397942 SPATA31A1Q5TZJ5 1347 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 RAD51CO43502 376 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 PRPSAP2O60256 369 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 KCNJ1P48048 391 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 OR2W6PQ8NHA6 318 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 SLC35G2Q8TBE7 412 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 GINM1Q9NU53 330 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 MEFVO15553 781 aaPredicted RBP13.3□□□□□ -0.28
SOCS6-201ENST00000397942 SPARCL1Q14515 664 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 HP1BP3Q5SSJ5 553 aaPredicted RBP13.3□□□□□ -0.28
SOCS6-201ENST00000397942 CATSPER3Q86XQ3 398 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 DNAAF3Q8N9W5 541 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 DAGLBQ8NCG7 672 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 GJD4Q96KN9 370 aaPredicted RBP13.3□□□□□ -0.28
SOCS6-201ENST00000397942 ZIM3Q96PE6 472 aa13.3□□□□□ -0.28
SOCS6-201ENST00000397942 ZBTB22O15209 634 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 NT5DC1Q5TFE4 455 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 LMBRD2Q68DH5 695 aaPredicted RBP13.29□□□□□ -0.28
SOCS6-201ENST00000397942 ARHGAP27Q6ZUM4 889 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 PCGF5Q86SE9 256 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 CCT6BQ92526 530 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 TRIM51Q9BSJ1 452 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 TUFT1Q9NNX1 390 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 SEPT10Q9P0V9 454 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 PCSK1NQ9UHG2 260 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 A0A087X0B3 334 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 PSMA2P25787 234 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 KLHDC7AQ5VTJ3 777 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 PSPC1Q8WXF1 523 aaKnown RBP13.29□□□□□ -0.28
SOCS6-201ENST00000397942 CALR3Q96L12 384 aaKnown RBP13.29□□□□□ -0.28
SOCS6-201ENST00000397942 PSD3Q9NYI0 1048 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 WTIPA6NIX2 430 aaPredicted RBP13.29□□□□□ -0.28
SOCS6-201ENST00000397942 ZBED1O96006 694 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 MDH1P40925 334 aaKnown RBP13.29□□□□□ -0.28
SOCS6-201ENST00000397942 PMS1P54277 932 aaKnown RBP13.29□□□□□ -0.28
SOCS6-201ENST00000397942 DHX34Q14147 1143 aaKnown RBP13.29□□□□□ -0.28
SOCS6-201ENST00000397942 TFDP2Q14188 446 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 SURF1Q15526 300 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 CYFIP1Q7L576 1253 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 ZWILCHQ9H900 591 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 M0QZ92 97 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 MED7O43513 233 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 HDLBPQ00341 1268 aaKnown RBP13.29□□□□□ -0.28
SOCS6-201ENST00000397942 RHOT1Q8IXI2 618 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 WRNIP1Q96S55 665 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 MKNK1Q9BUB5 465 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 WNT8AQ9H1J5 351 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 ATP6V0A4Q9HBG4 840 aa13.29□□□□□ -0.28
SOCS6-201ENST00000397942 GMNNO75496 209 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms