RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 CLIC2O15247 247 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 ATG7O95352 703 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 MYCNP04198 464 aaPredicted RBP11.17□□□□□ -0.62
HIF1A-203ENST00000394997 CALRP27797 417 aaKnown RBP11.17□□□□□ -0.62
HIF1A-203ENST00000394997 TGFB2P61812 414 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 GRM1Q13255 1194 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 FBXW10Q5XX13 1052 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 IQCKQ8N0W5 287 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 NUCKS1Q9H1E3 243 aaKnown RBP11.17□□□□□ -0.62
HIF1A-203ENST00000394997 GOLPH3Q9H4A6 298 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 ARHGEF10LQ9HCE6 1279 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 PACSIN2Q9UNF0 486 aaPredicted RBP11.17□□□□□ -0.62
HIF1A-203ENST00000394997 BACH1O14867 736 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 CXCR5P32302 372 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 RASA3Q14644 834 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 PPP2R5AQ15172 486 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 ANKRD13CQ8N6S4 541 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 IFT81Q8WYA0 676 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 SEMA4DQ92854 862 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 ARHGEF26Q96DR7 871 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 KREMEN1Q96MU8 473 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 XPNPEP1Q9NQW7 623 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 ADAMTS1Q9UHI8 967 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 TULP2O00295 520 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 HSF2BPO75031 334 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 RBM5P52756 815 aaKnown RBP eCLIP11.17□□□□□ -0.62
HIF1A-203ENST00000394997 NPEPPSP55786 919 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 UAP1Q16222 522 aaPredicted RBP11.17□□□□□ -0.62
HIF1A-203ENST00000394997 TTMPQ5BVD1 217 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 MMS22LQ6ZRQ5 1243 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 EP400NLQ6ZTU2 488 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 TAX1BP1Q86VP1 789 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 EFCAB13Q8IY85 973 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 SAMD3Q8N6K7 520 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 TMEM161BQ8NDZ6 487 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 ACTRT1Q8TDG2 376 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 CDK5RAP3Q96JB5 506 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 PCDHB18PQ96TA0 734 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 INTUQ9ULD6 942 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 TRPM7Q96QT4 1865 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 TSC2P49815 1807 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 NEBLO76041 1014 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 CLSTN1O94985 981 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 FGFR1OPO95684 399 aaKnown RBP11.16□□□□□ -0.62
HIF1A-203ENST00000394997 EPB41P11171 864 aaKnown RBP11.16□□□□□ -0.62
HIF1A-203ENST00000394997 DLGAP5Q15398 846 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 KCTD19Q17RG1 926 aaPredicted RBP11.16□□□□□ -0.62
HIF1A-203ENST00000394997 C4orf19Q8IY42 314 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 SELENOOQ9BVL4 669 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 BUB1O43683 1085 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 CFBP00751 764 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 RNASE9P60153 205 aaKnown RBP11.16□□□□□ -0.62
HIF1A-203ENST00000394997 SPA17Q15506 151 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 PACS2Q86VP3 889 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 EHBP1Q8NDI1 1231 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 LPAR1Q92633 364 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 PDCD2LQ9BRP1 358 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 ZNF577Q9BSK1 485 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 ISCUQ9H1K1 167 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 PARVGQ9HBI0 331 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 FZD1Q9UP38 647 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.16□□□□□ -0.62
HIF1A-203ENST00000394997 A0A087WUV0 522 aaPredicted RBP11.16□□□□□ -0.62
HIF1A-203ENST00000394997 EVI5O60447 810 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 MTA2O94776 668 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 PAFAH1B1P43034 410 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 RPS6P62753 249 aaKnown RBP11.16□□□□□ -0.62
HIF1A-203ENST00000394997 MICALCLQ6ZW33 695 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.16□□□□□ -0.62
HIF1A-203ENST00000394997 USP38Q8NB14 1042 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 HELQQ8TDG4 1101 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 TSG101Q99816 390 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 CBWD1Q9BRT8 395 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 ZNF341Q9BYN7 854 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 STYXL1Q9Y6J8 313 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 PTPRJQ12913 1337 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 ADGRA2Q96PE1 1338 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 ANKRD63C9JTQ0 380 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 CLGNO14967 610 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 CTNND1O60716 968 aaKnown RBP11.16□□□□□ -0.62
HIF1A-203ENST00000394997 PPFIA4O75335 1185 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 KIF5AQ12840 1032 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 NOL9Q5SY16 702 aaKnown RBP11.16□□□□□ -0.62
HIF1A-203ENST00000394997 UBR7Q8N806 425 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 GINM1Q9NU53 330 aa11.16□□□□□ -0.62
HIF1A-203ENST00000394997 MRPL11Q9Y3B7 192 aaKnown RBP11.16□□□□□ -0.62
HIF1A-203ENST00000394997 ASNSP08243 561 aa11.15□□□□□ -0.62
HIF1A-203ENST00000394997 MAGEA1P43355 309 aa11.15□□□□□ -0.62
HIF1A-203ENST00000394997 BFSP1Q12934 665 aa11.15□□□□□ -0.62
HIF1A-203ENST00000394997 VSIG10LQ86VR7 867 aa11.15□□□□□ -0.62
HIF1A-203ENST00000394997 NEK9Q8TD19 979 aa11.15□□□□□ -0.62
HIF1A-203ENST00000394997 SLC16A10Q8TF71 515 aa11.15□□□□□ -0.62
HIF1A-203ENST00000394997 CASKIN2Q8WXE0 1202 aa11.15□□□□□ -0.62
HIF1A-203ENST00000394997 ZNF516Q92618 1163 aa11.15□□□□□ -0.62
HIF1A-203ENST00000394997 STK33Q9BYT3 514 aa11.15□□□□□ -0.62
HIF1A-203ENST00000394997 TANGO6Q9C0B7 1094 aa11.15□□□□□ -0.62
HIF1A-203ENST00000394997 OSGEPQ9NPF4 335 aa11.15□□□□□ -0.62
HIF1A-203ENST00000394997 ARMCX3Q9UH62 379 aaPredicted RBP11.15□□□□□ -0.62
HIF1A-203ENST00000394997 HYOU1Q9Y4L1 999 aa11.15□□□□□ -0.62
HIF1A-203ENST00000394997 MEFVO15553 781 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms