RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 NUCKS1Q9H1E3 243 aaKnown RBP17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 OSGEPQ9NPF4 335 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 ZNF536O15090 1300 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 CENPFP49454 3210 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 PLS3P13797 630 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 DSG3P32926 999 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 STAT5BP51692 787 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 EDRF1Q3B7T1 1238 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 BRWD3Q6RI45 1802 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 LAMB2P55268 1798 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 ANKRD63C9JTQ0 380 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 TXNP10599 105 aaKnown RBP17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 KCNJ6P48051 423 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 PLCB3Q01970 1234 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 IFI16Q16666 785 aaKnown RBP17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 SPOPLQ6IQ16 392 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 RPUSD2Q8IZ73 545 aaKnown RBP17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 BTBD6Q96KE9 485 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 NT5C1BQ96P26 610 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 C1orf112Q9NSG2 853 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 FKBP1CQ5VVH2 108 aa17.21■□□□□ 0.35
SMARCD1-202ENST00000394963 CC2D1AQ6P1N0 951 aaPredicted RBP17.21■□□□□ 0.35
SMARCD1-202ENST00000394963 HDXQ7Z353 690 aa17.21■□□□□ 0.35
SMARCD1-202ENST00000394963 SESTD1Q86VW0 696 aa17.21■□□□□ 0.35
SMARCD1-202ENST00000394963 MPHOSPH6Q99547 160 aaKnown RBP17.21■□□□□ 0.35
SMARCD1-202ENST00000394963 ZMYND15Q9H091 742 aa17.21■□□□□ 0.35
SMARCD1-202ENST00000394963 DDX47Q9H0S4 455 aaKnown RBP17.21■□□□□ 0.35
SMARCD1-202ENST00000394963 ATP6V0A4Q9HBG4 840 aa17.21■□□□□ 0.35
SMARCD1-202ENST00000394963 RASSF10A6NK89 507 aa17.21■□□□□ 0.35
SMARCD1-202ENST00000394963 NPM3O75607 178 aaKnown RBP17.21■□□□□ 0.35
SMARCD1-202ENST00000394963 PCNX4Q63HM2 1172 aa17.21■□□□□ 0.35
SMARCD1-202ENST00000394963 SLC20A1Q8WUM9 679 aa17.21■□□□□ 0.35
SMARCD1-202ENST00000394963 MRRFQ96E11 262 aaKnown RBP17.21■□□□□ 0.35
SMARCD1-202ENST00000394963 ATRNL1Q5VV63 1379 aa17.21■□□□□ 0.35
SMARCD1-202ENST00000394963 FTLP02792 175 aaPredicted RBP17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 SNX1Q13596 522 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 SLC18A3Q16572 532 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 GOLGA5Q8TBA6 731 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 ZNF653Q96CK0 615 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 NRBP2Q9NSY0 501 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 SALL4Q9UJQ4 1053 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 TIAM2Q8IVF5 1701 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 SCN9AQ15858 1988 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 NAV1Q8NEY1 1877 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 ZSCAN5CA6NGD5 496 aaPredicted RBP17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 C19orf81C9J6K1 198 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 HPDP32754 393 aaPredicted RBP17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 GALCP54803 685 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 IFFO1Q0D2I5 559 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 PPP2R5CQ13362 524 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 HDAC7Q8WUI4 952 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 OPTNQ96CV9 577 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 AMFRQ9UKV5 643 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 PCDHB4Q9Y5E5 795 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 SPDYE16A6NNV3 312 aaPredicted RBP17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 PIK3CDO00329 1044 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 PIK3R2O00459 728 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 ZEB2O60315 1214 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 FERP16591 822 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 NOVP48745 357 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 ORC1Q13415 861 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 INTS8Q75QN2 995 aaKnown RBP17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 ARMC9Q7Z3E5 817 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 UBLCP1Q8WVY7 318 aaPredicted RBP17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 BBXQ8WY36 941 aaPredicted RBP17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 DNAJC17Q9NVM6 304 aaKnown RBP17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 DOCK2Q92608 1830 aa17.2■□□□□ 0.34
SMARCD1-202ENST00000394963 DKC1O60832 514 aaKnown RBP eCLIP17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 HEXIM1O94992 359 aaKnown RBP17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 ZSCAN20P17040 1043 aaPredicted RBP17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 TCF7P36402 384 aaPredicted RBP17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 UPF1Q92900 1129 aaKnown RBP eCLIP17.19■□□□□ 0.348e-8■■■■□ 25.2
SMARCD1-202ENST00000394963 CYP39A1Q9NYL5 469 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 ZNF233A6NK53 670 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 TBC1D12O60347 775 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 TLR2O60603 784 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 CYP3A4P08684 503 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 TCP1P17987 556 aaKnown RBP17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 KAZNQ674X7 775 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 ANO5Q75V66 913 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 GPC2Q8N158 579 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 FAM118BQ9BPY3 351 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 SYT17Q9BSW7 474 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 NFU1Q9UMS0 254 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 POTEJP0CG39 1038 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 PPP3CAQ08209 521 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 TMEM270Q6UE05 265 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 LMBR1Q8WVP7 490 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 CDHR1Q96JP9 859 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 CCDC114Q96M63 670 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 MMP19Q99542 508 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 MYH8P13535 1937 aa17.19■□□□□ 0.34
SMARCD1-202ENST00000394963 PDE2AO00408 941 aaPredicted RBP17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 CLDN3O15551 220 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 N4BP1O75113 896 aaKnown RBP17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 SFNP31947 248 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 EPHX2P34913 555 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 PDE6CP51160 858 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 CLCN3P51790 818 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 TRIP13Q15645 432 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms