RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 DCTN4Q9UJW0 460 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 MYH14Q7Z406 1995 aaKnown RBP15.66■□□□□ 0.1
SFXN3-202ENST00000393459 PVALEFA0A1B0GWK0 134 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 C5orf60A6NFR6 353 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 RBAK-RBAKDNI3L0D1 243 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 NTSR2O95665 410 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 CDK8P49336 464 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 COPS2P61201 443 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 CNGA2Q16280 664 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 RNF220Q5VTB9 566 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 CYP2W1Q8TAV3 490 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 HOOK2Q96ED9 719 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 RUSC1Q9BVN2 902 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 RIC8AQ9NPQ8 531 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 ATP8A2Q9NTI2 1148 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 DNAJC12Q9UKB3 198 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 SLC12A4Q9UP95 1085 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 ALG6Q9Y672 507 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 A0A1W2PRG0 241 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 PALM3A6NDB9 673 aaPredicted RBP15.66■□□□□ 0.1
SFXN3-202ENST00000393459 USP17L10C9JJH3 530 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 POC1B-GALNT4F8VUJ3 575 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 EDIL3O43854 480 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 GNAT1P11488 350 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 PRPHP41219 470 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 AUHQ13825 339 aaKnown RBP15.66■□□□□ 0.1
SFXN3-202ENST00000393459 IFI16Q16666 785 aaKnown RBP15.66■□□□□ 0.1
SFXN3-202ENST00000393459 GRIPAP1Q4V328 841 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 LACTB2Q53H82 288 aaPredicted RBP15.66■□□□□ 0.1
SFXN3-202ENST00000393459 ZDHHC24Q6UX98 284 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 DGKHQ86XP1 1220 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 C4orf33Q8N1A6 199 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 KAT5Q92993 513 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 REEP2Q9BRK0 252 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 CNTNAP4Q9C0A0 1308 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 SUN1O94901 812 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 EPHB2P29323 1055 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 TMED2Q15363 201 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 LINC00116Q8NCU8 138 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 SLC30A5Q8TAD4 765 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 TLCD1Q96CP7 247 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 NSRP1Q9H0G5 558 aaKnown RBP15.65■□□□□ 0.1
SFXN3-202ENST00000393459 CNOT10Q9H9A5 744 aaKnown RBP15.65■□□□□ 0.1
SFXN3-202ENST00000393459 COL5A3P25940 1745 aaPredicted RBP15.65■□□□□ 0.1
SFXN3-202ENST00000393459 PFASO15067 1338 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 KIAA0391O15091 583 aaKnown RBP15.65■□□□□ 0.1
SFXN3-202ENST00000393459 CLDN3O15551 220 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 HIP1RO75146 1068 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 CYP11B2P19099 503 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 HOXA13P31271 388 aaPredicted RBP15.65■□□□□ 0.1
SFXN3-202ENST00000393459 ZNF131P52739 623 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 INHBEP58166 350 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 KLRC3Q07444 240 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 OVGP1Q12889 678 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 ZCWPW2Q504Y3 356 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 MIS18BP1Q6P0N0 1132 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 SPATA21Q7Z572 469 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 RUBCNQ92622 972 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 MTMR9Q96QG7 549 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 MTA3Q9BTC8 594 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 AIPL1Q9NZN9 384 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 DLGAP2Q9P1A6 1054 aa15.65■□□□□ 0.1
SFXN3-202ENST00000393459 CCDC188H7C350 402 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 LAD1O00515 517 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 MMP13P45452 471 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 PDE6CP51160 858 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 CDC42EP4Q9H3Q1 356 aaKnown RBP15.64■□□□□ 0.09
SFXN3-202ENST00000393459 TTC7AQ9ULT0 858 aaPredicted RBP15.64■□□□□ 0.09
SFXN3-202ENST00000393459 COL4A1P02462 1669 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 LINGO3P0C6S8 592 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 PYGMP11217 842 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 RFC5P40937 340 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 MGAT5Q09328 741 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 PSMD2Q13200 908 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 DPP8Q6V1X1 898 aaPredicted RBP15.64■□□□□ 0.09
SFXN3-202ENST00000393459 INTS8Q75QN2 995 aaKnown RBP15.64■□□□□ 0.09
SFXN3-202ENST00000393459 EGFL6Q8IUX8 553 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 UCMAQ8WVF2 138 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 L3MBTL3Q96JM7 780 aaPredicted RBP15.64■□□□□ 0.09
SFXN3-202ENST00000393459 RPS6KC1Q96S38 1066 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 KLF6Q99612 283 aaPredicted RBP15.64■□□□□ 0.09
SFXN3-202ENST00000393459 EBF2Q9HAK2 575 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 KLHL11Q9NVR0 708 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 STK17AQ9UEE5 414 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 MTRF1LQ9UGC7 380 aaKnown RBP15.64■□□□□ 0.09
SFXN3-202ENST00000393459 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.64■□□□□ 0.09
SFXN3-202ENST00000393459 DOCK2Q92608 1830 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 MAPK7Q13164 816 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 CBWD6Q4V339 395 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 ARSHQ5FYA8 562 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 CBWD3Q5JTY5 395 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 CBWD5Q5RIA9 395 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 SYCP2LQ5T4T6 812 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 APBB1IPQ7Z5R6 666 aaPredicted RBP15.64■□□□□ 0.09
SFXN3-202ENST00000393459 PIGWQ7Z7B1 504 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 PRELID2Q8N945 189 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 NAF1Q96HR8 494 aaKnown RBP15.64■□□□□ 0.09
SFXN3-202ENST00000393459 NUDCD1Q96RS6 583 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 ZDHHC18Q9NUE0 388 aa15.64■□□□□ 0.09
SFXN3-202ENST00000393459 SLC5A4Q9NY91 659 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms