RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 ZNF720Q7Z2F6 126 aa13.85□□□□□ -0.19
ERCC2-204ENST00000391945 TARS2Q9BW92 718 aaKnown RBP13.85□□□□□ -0.19
ERCC2-204ENST00000391945 RBAKQ9NYW8 714 aaPredicted RBP13.85□□□□□ -0.19
ERCC2-204ENST00000391945 CCDC151A5D8V7 595 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 ASB14A6NK59 587 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 SPATA31C1P0DKV0 1188 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 PASD1Q8IV76 773 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 TCP11Q8WWU5 503 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 KRT12Q99456 494 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 M0R2N6 131 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 SLC26A4O43511 780 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 ACTN2P35609 894 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 PPP2R5CQ13362 524 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 NAP1L3Q99457 506 aaPredicted RBP13.84□□□□□ -0.19
ERCC2-204ENST00000391945 ANKEF1Q9NU02 776 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 AGTPBP1Q9UPW5 1226 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 GOLGA6BA6NDN3 693 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 ATP1A1P05023 1023 aaKnown RBP13.84□□□□□ -0.19
ERCC2-204ENST00000391945 VPS41P49754 854 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 SLC7A5Q01650 507 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 NFX1Q12986 1120 aaKnown RBP13.84□□□□□ -0.19
ERCC2-204ENST00000391945 CATSPERGQ6ZRH7 1159 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 CCDC105Q8IYK2 499 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 ANKRD36BP1Q96IX9 119 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 CYP26B1Q9NR63 512 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 DUSP10Q9Y6W6 482 aa13.84□□□□□ -0.19
ERCC2-204ENST00000391945 DYNC1LI2O43237 492 aaPredicted RBP13.83□□□□□ -0.19
ERCC2-204ENST00000391945 CYP2B6P20813 491 aa13.83□□□□□ -0.19
ERCC2-204ENST00000391945 NFRKBQ6P4R8 1299 aa13.83□□□□□ -0.19
ERCC2-204ENST00000391945 TRIM50Q86XT4 487 aa13.83□□□□□ -0.19
ERCC2-204ENST00000391945 IFT20Q8IY31 132 aa13.83□□□□□ -0.19
ERCC2-204ENST00000391945 GPD1LQ8N335 351 aa13.83□□□□□ -0.19
ERCC2-204ENST00000391945 MTMR14Q8NCE2 650 aa13.83□□□□□ -0.19
ERCC2-204ENST00000391945 UBLCP1Q8WVY7 318 aaPredicted RBP13.83□□□□□ -0.19
ERCC2-204ENST00000391945 RPGRIP1Q96KN7 1286 aa13.83□□□□□ -0.19
ERCC2-204ENST00000391945 FGFBP2Q9BYJ0 223 aa13.83□□□□□ -0.19
ERCC2-204ENST00000391945 IKZF4Q9H2S9 585 aa13.83□□□□□ -0.19
ERCC2-204ENST00000391945 EFCC1Q9HA90 598 aa13.83□□□□□ -0.19
ERCC2-204ENST00000391945 PARP2Q9UGN5 583 aa13.83□□□□□ -0.19
ERCC2-204ENST00000391945 ATRNL1Q5VV63 1379 aa13.83□□□□□ -0.19
ERCC2-204ENST00000391945 TISP43B9A030 160 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 MYO1FO00160 1098 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 EIF3DO15371 548 aaKnown RBP eCLIP13.83□□□□□ -0.22e-7■□□□□ 8.6
ERCC2-204ENST00000391945 NEBLO76041 1014 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 NPTX2P47972 431 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 LY6KQ17RY6 165 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 CC2D1AQ6P1N0 951 aaPredicted RBP13.83□□□□□ -0.2
ERCC2-204ENST00000391945 TMEM270Q6UE05 265 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 CATSPER4Q7RTX7 472 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 CBWD2Q8IUF1 395 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 DPH5Q9H2P9 285 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 RPF1Q9H9Y2 349 aaKnown RBP13.83□□□□□ -0.2
ERCC2-204ENST00000391945 PRM3Q9NNZ6 103 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 MAP3K20Q9NYL2 800 aaKnown RBP13.83□□□□□ -0.2
ERCC2-204ENST00000391945 COL20A1Q9P218 1284 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 TTC16Q8NEE8 873 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 SUCLA2Q9P2R7 463 aaPredicted RBP13.83□□□□□ -0.2
ERCC2-204ENST00000391945 GOLGA8SH3BPF8 625 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 SLC16A3O15427 465 aaKnown RBP13.83□□□□□ -0.2
ERCC2-204ENST00000391945 MYL3P08590 195 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 PTGER2P43116 358 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 CLK2P49760 499 aaKnown RBP13.83□□□□□ -0.2
ERCC2-204ENST00000391945 ZNF280AP59817 542 aaPredicted RBP13.83□□□□□ -0.2
ERCC2-204ENST00000391945 GUCY2DQ02846 1103 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 TMEM62Q0P6H9 643 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 CALCOCO2Q13137 446 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 SEPT7Q16181 437 aaKnown RBP13.83□□□□□ -0.2
ERCC2-204ENST00000391945 VSIG10LQ86VR7 867 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 DNAAF5Q86Y56 855 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 RPUSD2Q8IZ73 545 aaKnown RBP13.83□□□□□ -0.2
ERCC2-204ENST00000391945 FBXL13Q8NEE6 735 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 FAM76AQ8TAV0 307 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 PLAGL2Q9UPG8 496 aa13.83□□□□□ -0.2
ERCC2-204ENST00000391945 SPDYE16A6NNV3 312 aaPredicted RBP13.82□□□□□ -0.2
ERCC2-204ENST00000391945 CYP26A1O43174 497 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 OPA1O60313 960 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 EVI5O60447 810 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 LDHAP00338 332 aaKnown RBP13.82□□□□□ -0.2
ERCC2-204ENST00000391945 TFRCP02786 760 aaKnown RBP13.82□□□□□ -0.2
ERCC2-204ENST00000391945 OATP04181 439 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 KCNA3P22001 575 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 BPIFB4P59827 614 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 TREML2Q5T2D2 321 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 HOOK3Q86VS8 718 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 PI4K2AQ9BTU6 479 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 CYP39A1Q9NYL5 469 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 ASIC3Q9UHC3 531 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 CETPP11597 493 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 P4HA1P13674 534 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 HPDP32754 393 aaPredicted RBP13.82□□□□□ -0.2
ERCC2-204ENST00000391945 RNF187Q5TA31 235 aaPredicted RBP13.82□□□□□ -0.2
ERCC2-204ENST00000391945 GSPT2Q8IYD1 628 aaKnown RBP13.82□□□□□ -0.2
ERCC2-204ENST00000391945 EXOC8Q8IYI6 725 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.82□□□□□ -0.2
ERCC2-204ENST00000391945 SCFD2Q8WU76 684 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 DYDC1Q8WWB3 177 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 ATRIPQ8WXE1 791 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 EDEM3Q9BZQ6 932 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 TBX20Q9UMR3 447 aa13.82□□□□□ -0.2
ERCC2-204ENST00000391945 SOX5P35711 763 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms