RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 LACTBP83111 547 aaPredicted RBP13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 KCNMA1Q12791 1236 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 CAPSQ13938 189 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 NFIL3Q16649 462 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 SLC39A4Q6P5W5 647 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 SLC17A8Q8NDX2 589 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 GOLGA5Q8TBA6 731 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 BORCS6Q96GS4 357 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 MMRN2Q9H8L6 949 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 AGPAT5Q9NUQ2 364 aa13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 GNEQ9Y223 722 aaKnown RBP13.35□□□□□ -0.27
SPTBN1-203ENST00000389980 TULP1O00294 542 aaPredicted RBP13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 PPFIA4O75335 1185 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 ALDH1A1P00352 501 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 XRCC5P13010 732 aaKnown RBP13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 CNGA1P29973 690 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 KRT9P35527 623 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 SLC26A2P50443 739 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 APLP1P51693 650 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 CLCN3P51790 818 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 FCGRTP55899 365 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 APBA1Q02410 837 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 METTL13Q8N6R0 699 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 DEPTORQ8TB45 409 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 BAG1Q99933 345 aaPredicted RBP13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 HSPBP1Q9NZL4 362 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 FRMD4BQ9Y2L6 1034 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 USP27XA6NNY8 438 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 H3BRB1 525 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 TPM1P09493 284 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 YY1P25490 414 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 NAMPTP43490 491 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 SLC35C1Q96A29 364 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 SAAL1Q96ER3 474 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 TTYH3Q9C0H2 523 aa13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 TUT1Q9H6E5 874 aaKnown RBP13.34□□□□□ -0.27
SPTBN1-203ENST00000389980 IGKV6-21A0A0C4DH24 114 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 HNRNPDLO14979 420 aaKnown RBP13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 TRPA1O75762 1119 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 IGHA2P01877 340 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 EDN1P05305 212 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 TRIM49P0CI25 452 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 TRIM49CP0CI26 452 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 SRGAP2CP0DJJ0 459 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 FLT3LGP49771 235 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 LAMTOR4Q0VGL1 99 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 TRIM14Q14142 442 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 DGKDQ16760 1214 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 EFCAB12Q6NXP0 572 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 TLK2Q86UE8 772 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 GPIHBP1Q8IV16 184 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 CNGA4Q8IV77 575 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 SLC9A9Q8IVB4 645 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 BICD1Q96G01 975 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 PANX2Q96RD6 677 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 METTL14Q9HCE5 456 aaKnown RBP13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 ABHD10Q9NUJ1 306 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 TRMT1Q9NXH9 659 aaKnown RBP13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 FAM184BQ9ULE4 1060 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 EXOC7Q9UPT5 735 aa13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 LUC7L2Q9Y383 392 aaKnown RBP13.33□□□□□ -0.28
SPTBN1-203ENST00000389980 SOWAHDA6NJG2 315 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 C22orf31O95567 290 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 AFPP02771 609 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 RBM10P98175 930 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 PRKCZQ05513 592 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 MTF1Q14872 753 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 PPP2R5AQ15172 486 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 IER5Q5VY09 327 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 RHPN2Q8IUC4 686 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 TRPV1Q8NER1 839 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 TRIB2Q92519 343 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 HVCN1Q96D96 273 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 PPP1R16BQ96T49 567 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 MKNK1Q9BUB5 465 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 SUCLA2Q9P2R7 463 aaPredicted RBP13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 CAPN11Q9UMQ6 739 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 TTLL13PA6NNM8 815 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 K7ERI5 159 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 NRDCO43847 1150 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 HOXD8P13378 290 aaPredicted RBP13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 KLRC1P26715 233 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 DLG4P78352 724 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 BEX3Q00994 111 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 TRIM32Q13049 653 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 E4F1Q66K89 784 aaPredicted RBP13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 XXYLT1Q8NBI6 393 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 RNF149Q8NC42 400 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 CCDC112Q8NEF3 446 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 PSPC1Q8WXF1 523 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 LSM14BQ9BX40 385 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 ZNF215Q9UL58 517 aaPredicted RBP13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 PPME1Q9Y570 386 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 SIP14410 1827 aa13.32□□□□□ -0.28
SPTBN1-203ENST00000389980 TRIP12Q14669 1992 aaPredicted RBP13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 A6NJR5 290 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 RBAK-RBAKDNI3L0D1 243 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 ADRB2P07550 413 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 STRN3Q13033 797 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms