RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 CYP21A2P08686 494 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 PDCP20941 246 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 FPR2P25090 351 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 BCL6P41182 706 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 MC3RP41968 323 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 GRIA2P42262 883 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 TERF1P54274 439 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 CEBPZQ03701 1054 aaKnown RBP4.32□□□□□ -1.72
SMC6-202ENST00000381272 NOLC1Q14978 699 aaKnown RBP eCLIP4.32□□□□□ -1.72
SMC6-202ENST00000381272 MCMDC2Q4G0Z9 681 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 SLC35F1Q5T1Q4 408 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 SASS6Q6UVJ0 657 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 TTLL7Q6ZT98 887 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 RIOX2Q8IUF8 465 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 FAM177A1Q8N128 213 aaPredicted RBP4.32□□□□□ -1.72
SMC6-202ENST00000381272 RCBTB1Q8NDN9 531 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 ST13P5Q8NFI4 369 aaPredicted RBP4.32□□□□□ -1.72
SMC6-202ENST00000381272 TMEM169Q96HH4 297 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 NUP62CLQ9H1M0 184 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 ALDH8A1Q9H2A2 487 aaPredicted RBP4.32□□□□□ -1.72
SMC6-202ENST00000381272 HMG20BQ9P0W2 317 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 PPP1R1BQ9UD71 204 aaPredicted RBP4.32□□□□□ -1.72
SMC6-202ENST00000381272 PMF1-BGLAPU3KQ54 211 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 MRC1P22897 1456 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 KIF1AQ12756 1690 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 A1BGP04217 495 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 CCDC192P0DO97 292 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 ATF3P18847 181 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 CDK11BP21127 795 aaKnown RBP4.32□□□□□ -1.72
SMC6-202ENST00000381272 SLC6A11P48066 632 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 CACNB2Q08289 660 aaPredicted RBP4.32□□□□□ -1.72
SMC6-202ENST00000381272 MAP4K2Q12851 820 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 RESTQ13127 1097 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 LSAMPQ13449 338 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 RABL6Q3YEC7 729 aaPredicted RBP4.32□□□□□ -1.72
SMC6-202ENST00000381272 LRRC24Q50LG9 513 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 DENND5AQ6IQ26 1287 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 LILRA6Q6PI73 481 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 STOX1Q6ZVD7 989 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 CHST3Q7LGC8 479 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 ATG9AQ7Z3C6 839 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 LUZP1Q86V48 1076 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 SP8Q8IXZ3 490 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 Q8N1Y9 231 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 PLBD2Q8NHP8 589 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 FNIP1Q8TF40 1166 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 LEO1Q8WVC0 666 aaPredicted RBP4.32□□□□□ -1.72
SMC6-202ENST00000381272 SEC14L1Q92503 715 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 GTF3C6Q969F1 213 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 C1orf159Q96HA4 380 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 PGBD1Q96JS3 809 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 IER2Q9BTL4 223 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 TANGO6Q9C0B7 1094 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 TNMDQ9H2S6 317 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 DACT1Q9NYF0 836 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 NAP1L2Q9ULW6 460 aaPredicted RBP4.32□□□□□ -1.72
SMC6-202ENST00000381272 PYCARDQ9ULZ3 195 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 COA3Q9Y2R0 106 aaPredicted RBP4.32□□□□□ -1.72
SMC6-202ENST00000381272 PCDHA2Q9Y5H9 948 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 X6R8D5 127 aa4.32□□□□□ -1.72
SMC6-202ENST00000381272 JCADQ9P266 1359 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 ADAMTSL3P82987 1691 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 MYH15Q9Y2K3 1946 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 H3BQV1 296 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 H7BY64 318 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 ATP2B1P20020 1258 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 CCT2P78371 535 aaKnown RBP4.31□□□□□ -1.72
SMC6-202ENST00000381272 GUCY1B3Q02153 619 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 KRT32Q14532 448 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 ANO6Q4KMQ2 910 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 KBTBD3Q8NAB2 608 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 SMARCC2Q8TAQ2 1214 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 BICD2Q8TD16 824 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 PIBF1Q8WXW3 757 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 PUS3Q9BZE2 481 aaKnown RBP4.31□□□□□ -1.72
SMC6-202ENST00000381272 FTOQ9C0B1 505 aaKnown RBP eCLIP4.31□□□□□ -1.72
SMC6-202ENST00000381272 SCAND2PQ9GZW5 306 aaPredicted RBP4.31□□□□□ -1.72
SMC6-202ENST00000381272 PDCL3Q9H2J4 239 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 NCOA5Q9HCD5 579 aaKnown RBP4.31□□□□□ -1.72
SMC6-202ENST00000381272 PAG1Q9NWQ8 432 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 NPFFR2Q9Y5X5 522 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 ELP1O95163 1332 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 LAMB4A4D0S4 1761 aa4.31□□□□□ -1.72
SMC6-202ENST00000381272 M0R2C6 588 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 FFAR3O14843 346 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 CTDNEP1O95476 244 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 PLA2G1BP04054 148 aaKnown RBP4.3□□□□□ -1.72
SMC6-202ENST00000381272 LCP1P13796 627 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 HOXA5P20719 270 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 PTGS1P23219 599 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 CTSWP56202 376 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 HTRA3P83110 453 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 GLIPR1L2Q4G1C9 344 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 TTLL5Q6EMB2 1281 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 ETV3LQ6ZN32 361 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 MILR1Q7Z6M3 343 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 SAPCD2Q86UD0 394 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 NLRP10Q86W26 655 aa4.3□□□□□ -1.72
SMC6-202ENST00000381272 DRC7Q8IY82 874 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms