RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 SLC37A4O43826 429 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 TJP3O95049 919 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 MYBP10242 640 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 PPP4CP60510 307 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 DRP2Q13474 957 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 PSMD6Q15008 389 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 C1orf54Q8WWF1 131 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 TBX3O15119 743 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 GGPS1O95749 300 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 FGFR4P22455 802 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 KLHDC7AQ5VTJ3 777 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 EPM2AIP1Q7L775 607 aaPredicted RBP13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 PARP9Q8IXQ6 854 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 RAB3IL1Q8TBN0 382 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 PAGR1Q9BTK6 254 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 NAGPAQ9UK23 515 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 TTLL3Q9Y4R7 772 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 DENND3A2RUS2 1198 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 FAM107AO95990 144 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 PLS3P13797 630 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 ADRA2BP18089 450 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 PDE1BQ01064 536 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 EN1Q05925 392 aaPredicted RBP13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 SH3RF1Q7Z6J0 888 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 TRIM50Q86XT4 487 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 TRIM42Q8IWZ5 723 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 RNF25Q96BH1 459 aaPredicted RBP13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 ADPGKQ9BRR6 497 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 TTC7AQ9ULT0 858 aaPredicted RBP13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 PHF20L1A8MW92 1017 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 WDR64B1ANS9 1081 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 MMP10P09238 476 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 EPHA7Q15375 998 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 MAP3K21Q5TCX8 1036 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 HAUS6Q7Z4H7 955 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 MCPH1Q8NEM0 835 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 CDKL2Q92772 493 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 SUGT1Q9Y2Z0 365 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 DCTN3O75935 186 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 RPA1P27694 616 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 IRX4P78413 519 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 FAM160B1Q5W0V3 765 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 PASD1Q8IV76 773 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 TBC1D16Q8TBP0 767 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 SAAL1Q96ER3 474 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 RBM41Q96IZ5 413 aaKnown RBP13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 RMDN3Q96TC7 470 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 ZNF341Q9BYN7 854 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 CELF4Q9BZC1 486 aaKnown RBP13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 TUFT1Q9NNX1 390 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 TBC1D22BQ9NU19 505 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 TCHHQ07283 1943 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 GPR75-ASB3A0A0A6YYF3 556 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 PSAPP07602 524 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 NR1H3Q13133 447 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 MIS18BP1Q6P0N0 1132 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 MARCH10Q8NA82 808 aaPredicted RBP13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 ZNF408Q9H9D4 720 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 IVNS1ABPQ9Y6Y0 642 aa13.61□□□□□ -0.23
DNMT3A-204ENST00000380756 JAK3P52333 1124 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 MYO1EQ12965 1108 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 PTGISQ16647 500 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 AGBL2Q5U5Z8 902 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 RASIP1Q5U651 963 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 ERICH1Q86X53 443 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 FAM213AQ9BRX8 229 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 MSTO1Q9BUK6 570 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 NBPF3Q9H094 633 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 BCAP29Q9UHQ4 241 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 SSX2IPQ9Y2D8 614 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 CYP26A1O43174 497 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 AGTP01019 485 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 ZNF394Q53GI3 561 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 DARS2Q6PI48 645 aaKnown RBP13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 TMEM270Q6UE05 265 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 CYFIP2Q96F07 1278 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 MASTLQ96GX5 879 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 ANKRD36BP1Q96IX9 119 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 GINM1Q9NU53 330 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 RTN2O75298 545 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 NDUFB10O96000 172 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 ESRRAP11474 423 aaPredicted RBP13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 CYP11B2P19099 503 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 CCND2P30279 289 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 SLFN12LQ6IEE8 588 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 INTS5Q6P9B9 1019 aaKnown RBP13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 SEPT14Q6ZU15 432 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 AFAP1L2Q8N4X5 818 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 KCTD6Q8NC69 237 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 TMEM35BQ8NCS4 154 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 FBXL13Q8NEE6 735 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 GABPB2Q8TAK5 448 aaPredicted RBP13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 XPO6Q96QU8 1125 aaKnown RBP13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 TGS1Q96RS0 853 aaKnown RBP13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 TUBB6Q9BUF5 446 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 ETNK1Q9HBU6 452 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 CFAP73A6NFT4 308 aa13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 EAPPQ56P03 285 aaPredicted RBP13.6□□□□□ -0.23
DNMT3A-204ENST00000380756 JAMLQ86YT9 394 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms