RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 E9PBE3 544 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 GH1P01241 217 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 VDRP11473 427 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 CREB1P16220 341 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 MZF1P28698 734 aaPredicted RBP9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 PTPN4P29074 926 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 FAM209AQ5JX71 171 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 RALYLQ86SE5 291 aaKnown RBP9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 COL23A1Q86Y22 540 aaPredicted RBP9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 IRF2BP1Q8IU81 584 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 BBS5Q8N3I7 341 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 PI4KAP1Q8N8J0 262 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 MAK16Q9BXY0 300 aaKnown RBP9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 PABPC3Q9H361 631 aaKnown RBP9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 EBF3Q9H4W6 596 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 MMRN2Q9H8L6 949 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 METTL14Q9HCE5 456 aaKnown RBP9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 COQ6Q9Y2Z9 468 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 ZNF609O15014 1411 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 DDX3XO00571 662 aaKnown RBP eCLIP9.1□□□□□ -0.954e-7■■□□□ 14.2
NHLRC3-201ENST00000379599 VILLO15195 856 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 ZNF862O60290 1169 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 RANBP6O60518 1105 aaKnown RBP9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 SRGNP10124 158 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 ITGA4P13612 1032 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 UBE4AQ14139 1066 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 DEPDC1Q5TB30 811 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 C3orf62Q6ZUJ4 267 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 RASSF3Q86WH2 238 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 RIN3Q8TB24 985 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 ZNF507Q8TCN5 953 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 STARD8Q92502 1023 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 MRPL46Q9H2W6 279 aaKnown RBP9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 PARVBQ9HBI1 364 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 DDX43Q9NXZ2 648 aaKnown RBP9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 MOSPD1Q9UJG1 213 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 KCNJ14Q9UNX9 436 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 TRPM2O94759 1503 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 KAT6BQ8WYB5 2073 aa9.1□□□□□ -0.95
NHLRC3-201ENST00000379599 CFAP69A5D8W1 941 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 FOXO6A8MYZ6 492 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 BTBD19C9JJ37 291 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 UBE2Q2LH0YL09 131 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 GOLGA8TH3BQL2 631 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 GYG2O15488 501 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 GOLGA8HP0CJ92 632 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 ATP6V1B1P15313 513 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 RXRBP28702 533 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 PRCPP42785 496 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 PCYT1AP49585 367 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 METAP2P50579 478 aaKnown RBP eCLIP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 PPP2R2DQ66LE6 453 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 MICU3Q86XE3 530 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 GOLPH3Q9H4A6 298 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 TRNAU1APQ9NX07 287 aaKnown RBP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 NOTOA8MTQ0 251 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 ADCY6O43306 1168 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 HAUS5O94927 633 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 T-ENOLP0DO92 83 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 TOB1P50616 345 aaPredicted RBP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 PPP2R5BQ15173 497 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 TAF1BQ53T94 588 aaPredicted RBP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 CYB5R4Q7L1T6 521 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 RSPH3Q86UC2 560 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 DIS3L2Q8IYB7 885 aaKnown RBP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 CKAP2Q8WWK9 683 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 ESR2Q92731 530 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 SYMPKQ92797 1274 aaKnown RBP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 SKA1Q96BD8 255 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 VPS50Q96JG6 964 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 COX4I2Q96KJ9 171 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 NOC4LQ9BVI4 516 aaKnown RBP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 SLC26A6Q9BXS9 759 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 BHMT2Q9H2M3 363 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 CCPG1Q9ULG6 757 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 RPL26L1Q9UNX3 145 aaKnown RBP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 SRPRBQ9Y5M8 271 aaKnown RBP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 FAM170AA1A519 330 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 SH3PXD2BA1X283 911 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 PGRMC1O00264 195 aaKnown RBP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 TEX28O15482 410 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 DGKIO75912 1065 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 DCTN3O75935 186 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 OCM2P0CE71 109 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 OCMP0CE72 109 aaPredicted RBP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 EEF1GP26641 437 aaKnown RBP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 PCSK6P29122 969 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 KPNA1P52294 538 aaPredicted RBP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 GPR162Q16538 588 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 CGB2Q6NT52 195 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 NEK10Q6ZWH5 1172 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 CCDC25Q86WR0 208 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 CADM1Q9BY67 442 aaKnown RBP9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 GRIP2Q9C0E4 1043 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 NDE1Q9NXR1 346 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 NKIRAS1Q9NYS0 192 aa9.09□□□□□ -0.95
NHLRC3-201ENST00000379599 PDS5AQ29RF7 1337 aaKnown RBP9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 BCL9O00512 1426 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 PREX2Q70Z35 1606 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms