RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 WDR17Q8IZU2 1322 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 SRGAP2O75044 1071 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 NFICP08651 508 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 LRRC36Q1X8D7 754 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 TWF2Q6IBS0 349 aaKnown RBP14.09□□□□□ -0.15
HIPK3-202ENST00000379016 CNBD2Q96M20 576 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.09□□□□□ -0.15
HIPK3-202ENST00000379016 GOLGA8JA6NMD2 632 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 RPN2P04844 631 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 NR2F2P24468 414 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 C6orf10Q5SRN2 563 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 EPM2AIP1Q7L775 607 aaPredicted RBP14.09□□□□□ -0.15
HIPK3-202ENST00000379016 FAM133AQ8N9E0 248 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 FMO2Q99518 471 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 ECT2Q9H8V3 914 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 MPP6Q9NZW5 540 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 CNOT7Q9UIV1 285 aaKnown RBP14.09□□□□□ -0.15
HIPK3-202ENST00000379016 CD109Q6YHK3 1445 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 SEC31AO94979 1220 aaKnown RBP14.09□□□□□ -0.15
HIPK3-202ENST00000379016 CHGBP05060 677 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 COPB2P35606 906 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 TMED10P49755 219 aaKnown RBP14.09□□□□□ -0.15
HIPK3-202ENST00000379016 SPATA5Q8NB90 893 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 IRF1P10914 325 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 ST8SIA6P61647 398 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 DDI2Q5TDH0 399 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 KRT40Q6A162 431 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 ESRP1Q6NXG1 681 aaKnown RBP14.09□□□□□ -0.15
HIPK3-202ENST00000379016 G2E3Q7L622 706 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 BBS7Q8IWZ6 715 aa14.09□□□□□ -0.15
HIPK3-202ENST00000379016 INTS4Q96HW7 963 aaKnown RBP14.09□□□□□ -0.15
HIPK3-202ENST00000379016 EML4Q9HC35 981 aaKnown RBP14.09□□□□□ -0.15
HIPK3-202ENST00000379016 ERBB3P21860 1342 aa14.08□□□□□ -0.15
HIPK3-202ENST00000379016 PLCH2O75038 1416 aa14.08□□□□□ -0.15
HIPK3-202ENST00000379016 PDE8AO60658 829 aa14.08□□□□□ -0.15
HIPK3-202ENST00000379016 OR52Z1P0C646 297 aa14.08□□□□□ -0.15
HIPK3-202ENST00000379016 SSTR3P32745 418 aaPredicted RBP14.08□□□□□ -0.15
HIPK3-202ENST00000379016 PSMC5P62195 406 aa14.08□□□□□ -0.15
HIPK3-202ENST00000379016 KRT76Q01546 638 aa14.08□□□□□ -0.15
HIPK3-202ENST00000379016 NFIL3Q16649 462 aa14.08□□□□□ -0.15
HIPK3-202ENST00000379016 ZNF827Q17R98 1081 aa14.08□□□□□ -0.15
HIPK3-202ENST00000379016 TMA16Q96EY4 203 aaKnown RBP14.08□□□□□ -0.15
HIPK3-202ENST00000379016 ZNF274Q96GC6 653 aaPredicted RBP14.08□□□□□ -0.15
HIPK3-202ENST00000379016 ARPP21Q9UBL0 812 aaPredicted RBP14.08□□□□□ -0.15
HIPK3-202ENST00000379016 TTC7AQ9ULT0 858 aaPredicted RBP14.08□□□□□ -0.15
HIPK3-202ENST00000379016 HMGB3O15347 200 aaKnown RBP14.08□□□□□ -0.16
HIPK3-202ENST00000379016 TSPAN9O75954 239 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 TAF8Q7Z7C8 310 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 EPN1Q9Y6I3 576 aaPredicted RBP14.08□□□□□ -0.16
HIPK3-202ENST00000379016 TJP3O95049 919 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 FAM107AO95990 144 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 DEFA1P59665 94 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 DEFA3P59666 94 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 ARF3P61204 181 aaPredicted RBP14.08□□□□□ -0.16
HIPK3-202ENST00000379016 ARF1P84077 181 aaKnown RBP14.08□□□□□ -0.16
HIPK3-202ENST00000379016 ICA1Q05084 483 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 APPBP2Q92624 585 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 EDC3Q96F86 508 aaKnown RBP14.08□□□□□ -0.16
HIPK3-202ENST00000379016 LBHD1Q9BQE6 289 aaPredicted RBP14.08□□□□□ -0.16
HIPK3-202ENST00000379016 USP44Q9H0E7 712 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 DHX36Q9H2U1 1008 aaKnown RBP14.08□□□□□ -0.16
HIPK3-202ENST00000379016 ADD3Q9UEY8 706 aaKnown RBP14.08□□□□□ -0.16
HIPK3-202ENST00000379016 CLUP10909 449 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 PHKA1P46020 1223 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 LRRC41Q15345 812 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 OTUD7AQ8TE49 926 aaPredicted RBP14.08□□□□□ -0.16
HIPK3-202ENST00000379016 SPASTQ9UBP0 616 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 SYNPO2Q9UMS6 1093 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 FPGT-TNNI3KV9GXZ4 949 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 ZAP70P43403 619 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 ABCB5Q2M3G0 1257 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 SNX30Q5VWJ9 437 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 ELMO2Q96JJ3 720 aa14.08□□□□□ -0.16
HIPK3-202ENST00000379016 C4BPBP20851 252 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 RARS2Q5T160 578 aaKnown RBP14.07□□□□□ -0.16
HIPK3-202ENST00000379016 EHD2Q9NZN4 543 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 POLG2Q9UHN1 485 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 ALDH1L1O75891 902 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 ALDH1A1P00352 501 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 TIGD7Q6NT04 549 aaPredicted RBP14.07□□□□□ -0.16
HIPK3-202ENST00000379016 SLC44A2Q8IWA5 706 aaPredicted RBP14.07□□□□□ -0.16
HIPK3-202ENST00000379016 IQCF2Q8IXL9 164 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 MRPL50Q8N5N7 158 aaKnown RBP14.07□□□□□ -0.16
HIPK3-202ENST00000379016 AKAP10O43572 662 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 RAD51Q06609 339 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 CDC16Q13042 620 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 PKP3Q9Y446 797 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 PIPSLA2A3N6 862 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 MYO1CO00159 1063 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 CPB1P15086 417 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 BCAMP50895 628 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 NCKAP1LP55160 1127 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 SDE2Q6IQ49 451 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 PDXDC2PQ6P474 469 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 SPATA16Q9BXB7 569 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 CUEDC2Q9H467 287 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 STK17AQ9UEE5 414 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 COQ6Q9Y2Z9 468 aa14.07□□□□□ -0.16
HIPK3-202ENST00000379016 TROQ12816 1431 aaPredicted RBP14.07□□□□□ -0.16
HIPK3-202ENST00000379016 HPGDP15428 266 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms