RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 IER5Q5VY09 327 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 PADI6Q6TGC4 694 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 NSUN4Q96CB9 384 aaKnown RBP11.74□□□□□ -0.53
MDC1-201ENST00000376406 KRT3P12035 628 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 ENOSF1Q7L5Y1 443 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 CFAP61Q8NHU2 1237 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 DYDC2Q96IM9 177 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 STRIP2Q9ULQ0 834 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 HPCAL4Q9UM19 191 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 MAP3K7O43318 606 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 MT-ND3P03897 115 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 P4HBP07237 508 aaKnown RBP11.74□□□□□ -0.53
MDC1-201ENST00000376406 MYBL1P10243 752 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 RARBP10826 455 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 ACTN1P12814 892 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 CHST13Q8NET6 341 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 OR6J1Q8NGC5 347 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 RBM41Q96IZ5 413 aaKnown RBP11.74□□□□□ -0.53
MDC1-201ENST00000376406 KIF9Q9HAQ2 790 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 MORC2Q9Y6X9 1032 aaPredicted RBP11.74□□□□□ -0.53
MDC1-201ENST00000376406 TTC26A0AVF1 554 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 MARK3P27448 753 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 RECQLP46063 649 aaPredicted RBP11.74□□□□□ -0.53
MDC1-201ENST00000376406 IQCB1Q15051 598 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 USP17L6PQ6QN14 398 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 EEPD1Q7L9B9 569 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 MARCH10Q8NA82 808 aaPredicted RBP11.74□□□□□ -0.53
MDC1-201ENST00000376406 TTC25Q96NG3 672 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 MAP3K14Q99558 947 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.74□□□□□ -0.532e-6■■■□□ 17.8
MDC1-201ENST00000376406 TNS2Q63HR2 1409 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 CARNS1A5YM72 827 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 GSTA1P08263 222 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 GSTA2P09210 222 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 ERICH1Q86X53 443 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 SLC44A5Q8NCS7 719 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 DEPDC1BQ8WUY9 529 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 HEXIM2Q96MH2 286 aaKnown RBP11.74□□□□□ -0.53
MDC1-201ENST00000376406 TBK1Q9UHD2 729 aa11.74□□□□□ -0.53
MDC1-201ENST00000376406 COL3A1P02461 1466 aaPredicted RBP11.73□□□□□ -0.53
MDC1-201ENST00000376406 MYOM1P52179 1685 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 GGPS1O95749 300 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 SLCO1A2P46721 670 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 PSMC5P62195 406 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 TRIP13Q15645 432 aaPredicted RBP11.73□□□□□ -0.53
MDC1-201ENST00000376406 ZNF667Q5HYK9 610 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 C12orf60Q5U649 245 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 EDEM3Q9BZQ6 932 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 SMARCAD1Q9H4L7 1026 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 NXF1Q9UBU9 619 aaKnown RBP11.73□□□□□ -0.53
MDC1-201ENST00000376406 PDS5AQ29RF7 1337 aaKnown RBP11.73□□□□□ -0.53
MDC1-201ENST00000376406 FOXN1O15353 648 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 GAS2O43903 313 aaKnown RBP11.73□□□□□ -0.53
MDC1-201ENST00000376406 CD58P19256 250 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 PSMA2P25787 234 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 VAMP7P51809 220 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 SESN3P58005 492 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 DBN1Q16643 649 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 LINC00116Q8NCU8 138 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 GDAP1Q8TB36 358 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 CFAP36Q96G28 342 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 SNAP23O00161 211 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 MMEL1Q495T6 779 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 CALN1Q9BXU9 219 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 TUFT1Q9NNX1 390 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 LRRD1A4D1F6 860 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 SLC16A3O15427 465 aaKnown RBP11.73□□□□□ -0.53
MDC1-201ENST00000376406 CALB1P05937 261 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 SAT1P21673 171 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 CHRNA5P30532 468 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 SERPINB6P35237 376 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 NFX1Q12986 1120 aaKnown RBP11.73□□□□□ -0.53
MDC1-201ENST00000376406 RNF180Q86T96 592 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 RAB44Q7Z6P3 723 aaPredicted RBP11.73□□□□□ -0.53
MDC1-201ENST00000376406 FAM149B1Q96BN6 582 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 HVCN1Q96D96 273 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 C7orf25Q9BPX7 421 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 PIDD1Q9HB75 910 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 RAVER2Q9HCJ3 691 aaKnown RBP11.73□□□□□ -0.53
MDC1-201ENST00000376406 JPH1Q9HDC5 661 aaPredicted RBP11.73□□□□□ -0.53
MDC1-201ENST00000376406 POTEFA5A3E0 1075 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 POTEGQ6S5H5 508 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 POTEEQ6S8J3 1075 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 GPRC5AQ8NFJ5 357 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 ZNF560Q96MR9 790 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 CCSER1Q9C0I3 900 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 WNT8AQ9H1J5 351 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 KCND2Q9NZV8 630 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 ANAPC7Q9UJX3 599 aa11.73□□□□□ -0.53
MDC1-201ENST00000376406 PHLPP1O60346 1717 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 DPYSL4O14531 572 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 OPHN1O60890 802 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 CCZ1BP86790 482 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 CCZ1P86791 482 aaPredicted RBP11.72□□□□□ -0.53
MDC1-201ENST00000376406 FAM133BQ5BKY9 247 aaKnown RBP11.72□□□□□ -0.53
MDC1-201ENST00000376406 NFRKBQ6P4R8 1299 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 PDXDC1Q6P996 788 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 STAG2Q8N3U4 1231 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 PYROXD1Q8WU10 500 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms