RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 MOCS3O95396 460 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 ACTN1P12814 892 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 GTF2BQ00403 316 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 RBBP5Q15291 538 aaKnown RBP8.92□□□□□ -0.98
UBR4-202ENST00000375224 NAB2Q15742 525 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 IRF2BP2Q7Z5L9 587 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 CHST13Q8NET6 341 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 SH3GL3Q99963 347 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 TRIM6Q9C030 488 aaPredicted RBP8.92□□□□□ -0.98
UBR4-202ENST00000375224 ANKZF1Q9H8Y5 726 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 HDAC6Q9UBN7 1215 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 AFG3L2Q9Y4W6 797 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 FHOD1Q9Y613 1164 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 RLFQ13129 1914 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 COL11A1P12107 1806 aaPredicted RBP8.92□□□□□ -0.98
UBR4-202ENST00000375224 TARSL2A2RTX5 802 aaKnown RBP8.92□□□□□ -0.98
UBR4-202ENST00000375224 PSAPP07602 524 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 OAS2P29728 719 aaKnown RBP8.92□□□□□ -0.98
UBR4-202ENST00000375224 ARID5AQ03989 594 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 BFSP1Q12934 665 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 KIFAP3Q92845 792 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 STK33Q9BYT3 514 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 BCAS3Q9H6U6 928 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 MLXIPQ9HAP2 919 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 RIPK3Q9Y572 518 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 GOLGB1Q14789 3259 aaKnown RBP8.92□□□□□ -0.98
UBR4-202ENST00000375224 ATP9AO75110 1047 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 PAFAH1B1P43034 410 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 JAM2P57087 298 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 TMEM132BQ14DG7 1078 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 WDR93Q6P2C0 686 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 HAUS6Q7Z4H7 955 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 SIX2Q9NPC8 291 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 ADAMTS1Q9UHI8 967 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 INTUQ9ULD6 942 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 CAPN6Q9Y6Q1 641 aa8.92□□□□□ -0.98
UBR4-202ENST00000375224 H0YCG3 227 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 NCKAP1LP55160 1127 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 MYL7Q01449 175 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 NEDD9Q14511 834 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 KIAA0753Q2KHM9 967 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 MAEAQ7L5Y9 396 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 ZNF572Q7Z3I7 529 aaPredicted RBP8.91□□□□□ -0.98
UBR4-202ENST00000375224 RPUSD2Q8IZ73 545 aaKnown RBP8.91□□□□□ -0.98
UBR4-202ENST00000375224 XXYLT1Q8NBI6 393 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 DNERQ8NFT8 737 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.91□□□□□ -0.981e-9■■□□□ 11.5
UBR4-202ENST00000375224 RUBCNQ92622 972 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 EXOC4Q96A65 974 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 MIEF2Q96C03 454 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 EPC1Q9H2F5 836 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 CYP39A1Q9NYL5 469 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 FBXO40Q9UH90 709 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 A0A087X0T9 212 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 BACH1O14867 736 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 CCNE2O96020 404 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 RHOXF2BP0C7M4 288 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 FAM228BP0C875 321 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 PTK2Q05397 1052 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 DMP1Q13316 513 aaPredicted RBP8.91□□□□□ -0.98
UBR4-202ENST00000375224 CCDC181Q5TID7 509 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 PRAMEF18Q5VWM3 479 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 KSR1Q8IVT5 923 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 MCPH1Q8NEM0 835 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 LMBR1Q8WVP7 490 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 SPIRE2Q8WWL2 714 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 WNK4Q96J92 1243 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 CAPZA3Q96KX2 299 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 RHOXF2Q9BQY4 288 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 MYH10P35580 1976 aa8.91□□□□□ -0.98
UBR4-202ENST00000375224 SOX5P35711 763 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 APBA1Q02410 837 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 LONRF2Q1L5Z9 754 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 FAM102BQ5T8I3 360 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 MIS18BP1Q6P0N0 1132 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 USP37Q86T82 979 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 MSL3Q8N5Y2 521 aaKnown RBP8.9□□□□□ -0.98
UBR4-202ENST00000375224 OSBPL9Q96SU4 736 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 MMS19Q96T76 1030 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 JPH1Q9HDC5 661 aaPredicted RBP8.9□□□□□ -0.98
UBR4-202ENST00000375224 SLC9A2Q9UBY0 812 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 CSADQ9Y600 493 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 SPDYE16A6NNV3 312 aaPredicted RBP8.9□□□□□ -0.98
UBR4-202ENST00000375224 PMM2O15305 246 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 SRGAP2O75044 1071 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 USP2O75604 605 aaPredicted RBP8.9□□□□□ -0.98
UBR4-202ENST00000375224 KCNA2P16389 499 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 PAX7P23759 505 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 VAMP7P51809 220 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 PEX3P56589 373 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 RWDD2BP57060 319 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 RTP1P59025 263 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 PLS1Q14651 629 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 STXBP2Q15833 593 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 ENOX2Q16206 610 aaKnown RBP8.9□□□□□ -0.98
UBR4-202ENST00000375224 UGCGQ16739 394 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 ALKBH5Q6P6C2 394 aaKnown RBP8.9□□□□□ -0.98
UBR4-202ENST00000375224 RINLQ6ZS11 566 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 HDXQ7Z353 690 aa8.9□□□□□ -0.98
UBR4-202ENST00000375224 ZNF571Q7Z3V5 609 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms